RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 THEGQ9P2T0 379 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 SNX9Q9Y5X1 595 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 ANO9A1A5B4 782 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 TMEM189-UBE2V1I3L0A0 370 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 PIRO00625 290 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 KIAA0391O15091 583 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 TRAPPC3O43617 180 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 RFPL2O75678 378 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 CST3P01034 146 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 CYP3A5P20815 502 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 RPL9P32969 192 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 DUOXA2Q1HG44 320 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 C1orf220Q5T0J3 134 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 SPOPLQ6IQ16 392 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 TTI2Q6NXR4 508 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 ELOA2Q8IYF1 753 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 LNX1Q8TBB1 728 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 SUSD3Q96L08 255 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 MFSD14AQ96MC6 490 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 MED15Q96RN5 788 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 TMEM209Q96SK2 561 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 DUSP9Q99956 384 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 CLSTN3Q9BQT9 956 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 PI4K2AQ9BTU6 479 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 KIAA1586Q9HCI6 787 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 CGNQ9P2M7 1197 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 R3HCC1Q9Y3T6 440 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 MTCL1Q9Y4B5 1905 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 MYH10P35580 1976 aa7.81□□□□□ -1.16
DEPDC1B-201ENST00000265036 CETN3O15182 167 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 LILRB3O75022 631 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 PHACTR2O75167 634 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 MBD3O95983 291 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 GLUD1P00367 558 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 ADH1AP07327 375 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 EPB41P11171 864 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CPB1P15086 417 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 FGFR3P22607 806 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 ACAT1P24752 427 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 RPL13P26373 211 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 MYL6P60660 151 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 SNRPFP62306 86 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 YWHAHQ04917 246 aaPredicted RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 PPP3CAQ08209 521 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 ELAVL2Q12926 359 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 BMS1Q14692 1282 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 EDRF1Q3B7T1 1238 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CTXN3Q4LDR2 81 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 WSCD1Q658N2 575 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 USP37Q86T82 979 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 SLC9A9Q8IVB4 645 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 EFHBQ8N7U6 833 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CACTINQ8WUQ7 758 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 PIK3R5Q8WYR1 880 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 PABPC5Q96DU9 382 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 HPDLQ96IR7 371 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 ZNF560Q96MR9 790 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 NECAB3Q96P71 396 aaPredicted RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 MMS19Q96T76 1030 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 EMILIN2Q9BXX0 1053 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 MAN1C1Q9NR34 630 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CLEC1BQ9P126 229 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 NXF1Q9UBU9 619 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 ITGA11Q9UKX5 1188 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 DERAQ9Y315 318 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 WDFY4Q6ZS81 3184 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 WDR27A2RRH5 827 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 KPNA7A9QM74 516 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CYB561D2O14569 222 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 TGM5O43548 720 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 KRT13P13646 458 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 PSMC2P35998 433 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 RAP1GAPP47736 663 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CLCN4P51793 760 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 VAMP7P51809 220 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 FKBP3Q00688 224 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 ROR1Q01973 937 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 LRRC63Q05C16 580 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CCDC40Q4G0X9 1142 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 RARS2Q5T160 578 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 CCDC183Q5T5S1 534 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 OVOS1Q6IE37 1185 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 C11orf57Q6ZUT1 292 aaPredicted RBP7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 OR10T2Q8NGX3 314 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 TAS1R2Q8TE23 839 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 FBXL5Q9UKA1 691 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 L1RE1Q9UN81 338 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 POLIQ9UNA4 740 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 IRAK3Q9Y616 596 aa7.8□□□□□ -1.16
DEPDC1B-201ENST00000265036 SOAT2O75908 522 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 VNN1O95497 513 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ODC1P11926 461 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 IL9P15248 144 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 PIK3CAP42336 1068 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 AARSP49588 968 aaKnown RBP eCLIP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ORC1Q13415 861 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms