RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TMEM143Q96AN5 459 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 ISCA1Q9BUE6 129 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 FHOD1Q9Y613 1164 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 B2RBV5 119 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 SEC24CP53992 1094 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 MAP3K7CLP57077 242 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 CNBD2Q96M20 576 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 TFR2Q9UP52 801 aa18.86■□□□□ 0.61
COL5A3-201ENST00000264828 IGF2BP3O00425 579 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL5A3-201ENST00000264828 SLC9A5Q14940 896 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 ANKS3Q6ZW76 656 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 SCFD1Q8WVM8 642 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 AGAP1Q9UPQ3 857 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 WEE2P0C1S8 567 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 USP11P51784 963 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 REEP2Q9BRK0 252 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 SLC7A5P2Q9GIP4 190 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 VIPAS39Q9H9C1 493 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 PDGFRAP16234 1089 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 PLA2G4AP47712 749 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 NLRP11P59045 1033 aaKnown RBP18.85■□□□□ 0.61
COL5A3-201ENST00000264828 TBL3Q12788 808 aaKnown RBP18.85■□□□□ 0.61
COL5A3-201ENST00000264828 CCDC142Q17RM4 750 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 TRIM9Q9C026 710 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 CHORDC1Q9UHD1 332 aaPredicted RBP18.85■□□□□ 0.61
COL5A3-201ENST00000264828 SERPINB3P29508 390 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 APOBEC3FQ8IUX4 373 aaKnown RBP18.85■□□□□ 0.61
COL5A3-201ENST00000264828 TEX9Q8N6V9 391 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 TBC1D23Q9NUY8 699 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 TRADDQ15628 312 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 SMTNL2Q2TAL5 461 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 CDR2LQ86X02 465 aaPredicted RBP18.85■□□□□ 0.61
COL5A3-201ENST00000264828 ATPAF2Q8N5M1 289 aa18.85■□□□□ 0.61
COL5A3-201ENST00000264828 RFX7Q2KHR2 1363 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 CAND2O75155 1236 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 ASMTLO95671 621 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 AP3M2P53677 418 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 SCARF1Q14162 830 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 EPHA7Q15375 998 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 AGBL2Q5U5Z8 902 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 DAB2IPQ5VWQ8 1189 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 JAMLQ86YT9 394 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 CCT7Q99832 543 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 CD274Q9NZQ7 290 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 C16orf96A6NNT2 1141 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 CDH16O75309 829 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 FMO5P49326 533 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 ITGA8P53708 1063 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 SLC30A9Q6PML9 568 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 SPATA2LQ8IUW3 424 aaPredicted RBP18.84■□□□□ 0.61
COL5A3-201ENST00000264828 ZNF560Q96MR9 790 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 ZNF556Q9HAH1 456 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 TUFT1Q9NNX1 390 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 FAM32AQ9Y421 112 aaKnown RBP18.84■□□□□ 0.61
COL5A3-201ENST00000264828 MED14O60244 1454 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 MAFGO15525 162 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 UCHL3P15374 230 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 C3orf62Q6ZUJ4 267 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 ADCK2Q7Z695 626 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 MDM1Q8TC05 714 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 PHF21AQ96BD5 680 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 PIN4Q9Y237 131 aaKnown RBP18.84■□□□□ 0.61
COL5A3-201ENST00000264828 NT5C2P49902 561 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
COL5A3-201ENST00000264828 SNX31Q8N9S9 440 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 VPS50Q96JG6 964 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 KCNK16Q96T55 309 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 RPAP3Q9H6T3 665 aaPredicted RBP18.84■□□□□ 0.61
COL5A3-201ENST00000264828 ACAD9Q9H845 621 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 PIDD1Q9HB75 910 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 SLC40A1Q9NP59 571 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 EXOSC4Q9NPD3 245 aaKnown RBP18.84■□□□□ 0.61
COL5A3-201ENST00000264828 PCDHA10Q9Y5I2 948 aa18.84■□□□□ 0.61
COL5A3-201ENST00000264828 PODNQ7Z5L7 613 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 DDX53Q86TM3 631 aaKnown RBP18.83■□□□□ 0.61
COL5A3-201ENST00000264828 CCDC134Q9H6E4 229 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 ZC3H4Q9UPT8 1303 aaKnown RBP18.83■□□□□ 0.61
COL5A3-201ENST00000264828 PDGFRBP09619 1106 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 CCND1P24385 295 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 CHI3L2Q15782 390 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 SGO1Q5FBB7 561 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 HORMAD1Q86X24 394 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 GOLPH3Q9H4A6 298 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 DYRK4Q9NR20 520 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 EEF2KO00418 725 aaKnown RBP18.83■□□□□ 0.61
COL5A3-201ENST00000264828 NR1I3Q14994 352 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 TTC39BQ5VTQ0 682 aaPredicted RBP18.83■□□□□ 0.61
COL5A3-201ENST00000264828 ADSSL1Q8N142 457 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 RNF181Q9P0P0 153 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 SNX9Q9Y5X1 595 aa18.83■□□□□ 0.61
COL5A3-201ENST00000264828 MAGEA4P43358 317 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 TTC39CQ8N584 583 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 RBBP8NLQ8NC74 664 aaPredicted RBP18.83■□□□□ 0.6
COL5A3-201ENST00000264828 SMAD5Q99717 465 aaKnown RBP18.83■□□□□ 0.6
COL5A3-201ENST00000264828 JPH1Q9HDC5 661 aaPredicted RBP18.83■□□□□ 0.6
COL5A3-201ENST00000264828 LOC100653049A0A140TA62 436 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 ORC4O43929 436 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 KRT34O76011 436 aa18.83■□□□□ 0.6
COL5A3-201ENST00000264828 IMPDH2P12268 514 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms