RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 PPP1R14AQ96A00 147 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 GGPS1O95749 300 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 AGTP01019 485 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 CHRM3P20309 590 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 SFNP31947 248 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 KCNK10P57789 538 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 ZNF579Q8NAF0 562 aaKnown RBP15.8■□□□□ 0.12
NID1-201ENST00000264187 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 PNKPQ96T60 521 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 CHP1Q99653 195 aa15.8■□□□□ 0.12
NID1-201ENST00000264187 SEPT5Q99719 369 aaPredicted RBP15.8■□□□□ 0.12
NID1-201ENST00000264187 PGK2P07205 417 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 ZRANB3Q5FWF4 1079 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 ZNF560Q96MR9 790 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 SH3GL1Q99961 368 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 CUL7Q14999 1698 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 ATMINO43313 823 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 TRIM71Q2Q1W2 868 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 CCDC157Q569K6 752 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 PSMC3IPQ9P2W1 217 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 EEF2KO00418 725 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 RAB14P61106 215 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 MFSD4BQ5TF39 518 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 ZNF786Q8N393 782 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 DPF2Q92785 391 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 CHORDC1Q9UHD1 332 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 SMG5Q9UPR3 1016 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 PRKCBP05771 671 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 CDC16Q13042 620 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 BYSLQ13895 437 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 GFM2Q969S9 779 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 SEC16BQ96JE7 1060 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 CARD9Q9H257 536 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 FAM49BQ9NUQ9 324 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 SMNDC1O75940 238 aaKnown RBP eCLIP15.79■□□□□ 0.12
NID1-201ENST00000264187 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 APOA4P06727 396 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 MLNP12872 115 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 TRIM25Q14258 630 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 MROH9Q5TGP6 573 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 TTC33Q6PID6 262 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 C3orf62Q6ZUJ4 267 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 KRT78Q8N1N4 520 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 TSPAN17Q96FV3 270 aa15.79■□□□□ 0.12
NID1-201ENST00000264187 MAP3K20Q9NYL2 800 aaKnown RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 PRG3Q9Y2Y8 225 aaPredicted RBP15.79■□□□□ 0.12
NID1-201ENST00000264187 RPS7P62081 194 aaKnown RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 DDX39BQ13838 428 aaKnown RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 PRR23AA6NEV1 266 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 NME5P56597 212 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 TAP1Q03518 808 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 CYLC2Q14093 348 aaPredicted RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 CHI3L2Q15782 390 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 HLFQ16534 295 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 AGGF1Q8N302 714 aaeCLIP15.78■□□□□ 0.12
NID1-201ENST00000264187 ZNF614Q8N883 585 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 F8W810 466 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 AVPR1AP37288 418 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 CCDC149Q6ZUS6 474 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 TADA1Q96BN2 335 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 FAM129AQ9BZQ8 928 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 FAM47DPA6NHR8 397 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 F5H6K3 240 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 CLASP2O75122 1294 aaKnown RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 TADA2AO75478 443 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 PARNO95453 639 aaKnown RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 KLRC3Q07444 240 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 RPAP3Q9H6T3 665 aaPredicted RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 LY9Q9HBG7 655 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 IMPAD1Q9NX62 359 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 SLC39A10Q9ULF5 831 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 PFASO15067 1338 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 PTPRTO14522 1441 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 PHF2O75151 1096 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 ENOSF1Q7L5Y1 443 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 ACSF2Q96CM8 615 aaPredicted RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 ZNF512Q96ME7 567 aaPredicted RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 SENP7Q9BQF6 1050 aa15.78■□□□□ 0.12
NID1-201ENST00000264187 THUMPD3Q9BV44 507 aaKnown RBP15.78■□□□□ 0.12
NID1-201ENST00000264187 ALBP02768 609 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 KYNUQ16719 465 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 TRIM16LQ309B1 348 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 ARHGEF26Q96DR7 871 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 DEPDC7Q96QD5 511 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 ARHGEF3Q9NR81 526 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 SNX12Q9UMY4 172 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 ATP10BO94823 1461 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 RSPH10B2B2RC85 870 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 ECE2O60344 883 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 RSPH10BP0C881 870 aa15.77■□□□□ 0.12
NID1-201ENST00000264187 GALCP54803 685 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms