RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 DDB1Q16531 1140 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 SMTNL2Q2TAL5 461 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 ZCCHC23Q6ZST2 131 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 DRAXINQ8NBI3 349 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 GCNAQ96QF7 691 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 ANKRD2Q9GZV1 360 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 MMADHCQ9H3L0 296 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 KCNMB3Q9NPA1 279 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 C5P01031 1676 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 SLC16A4O15374 487 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 IGBP1P78318 339 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 PARP6Q2NL67 630 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 TCHHL1Q5QJ38 904 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 FAM102BQ5T8I3 360 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 ZSWIM2Q8NEG5 633 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 MECRQ9BV79 373 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 APOL6Q9BWW8 343 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 AAASQ9NRG9 546 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 BTNL10A8MVZ5 291 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 H0YIN7 160 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 EML1O00423 815 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 NTSR2O95665 410 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 GALK1P51570 392 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 SLC12A3P55017 1021 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 DRG2P55039 364 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 MFAP3P55082 362 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 NRG4Q8WWG1 115 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 CLMNQ96JQ2 1002 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 NT5C1BQ96P26 610 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 TXLNGYQ9BZA5 131 aa16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 MAGED2Q9UNF1 606 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-201ENST00000261897 ZMPSTE24O75844 475 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 CCNB1P14635 433 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 POLD1P28340 1107 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 PEX3P56589 373 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 NFIXQ14938 502 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 TBC1D25Q3MII6 688 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 INPP5DQ92835 1189 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 ITFG2Q969R8 447 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 MAK16Q9BXY0 300 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 WHRNQ9P202 907 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 TMEM150BA6NC51 233 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 TGFB1I1O43294 461 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 NELFEP18615 380 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 YARSP54577 528 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 C11orf63Q6NUN7 778 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 CASC4Q6P4E1 433 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 SATL1Q86VE3 508 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 SCUBE1Q8IWY4 988 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 NME8Q8N427 588 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 GLIS1Q8NBF1 620 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 CNBD2Q96M20 576 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 NMUR2Q9GZQ4 415 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 TAS2R1Q9NYW7 299 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 TDRKHQ9Y2W6 561 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 STARD13Q9Y3M8 1113 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 RIPOR1Q6ZS17 1223 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 RNF148Q8N7C7 305 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 GSTCDQ8NEC7 633 aa16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 ZNF395Q9H8N7 513 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-201ENST00000261897 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 HLA-DOAP06340 250 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 T-ENOLP0DO92 83 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 HOXD13P35453 343 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 SLC25A3Q00325 362 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 PPP2R5DQ14738 602 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 HIF1AQ16665 826 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 FBXO33Q7Z6M2 555 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 TRABD2AQ86V40 505 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 OGFOD1Q8N543 542 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 GRIP2Q9C0E4 1043 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 DNPEPQ9ULA0 475 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 COPEO14579 308 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 LZTS1Q9Y250 596 aa16.77■□□□□ 0.28
PRPF40B-201ENST00000261897 RICTORQ6R327 1708 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 XPO1O14980 1071 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 PEX1O43933 1283 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 PPP1R11O60927 126 aaPredicted RBP16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 PHBP35232 272 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 PEX6Q13608 980 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 LBRQ14739 615 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 LIN9Q5TKA1 542 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 TPTE2Q6XPS3 522 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 FBXO11Q86XK2 927 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 POMGNT1Q8WZA1 660 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 DCLK3Q9C098 648 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 EBF3Q9H4W6 596 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms