RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 B3GNT6Q6ZMB0 384 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 TDRPQ86YL5 185 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 TMPRSS6Q8IU80 811 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PANX3Q96QZ0 392 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 TSSK1BQ9BXA7 367 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 DCLK3Q9C098 648 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 LRRC4BQ9NT99 713 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ARMCX1Q9P291 453 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 DNAJB4Q9UDY4 337 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PPM1HQ9ULR3 514 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PAIP2BQ9ULR5 123 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 MEIS1O00470 390 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 SUPT3HO75486 399 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PGM3O95394 542 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 TRIM49P0CI25 452 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 TRIM49CP0CI26 452 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 BCRP11274 1271 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ALDH1B1P30837 517 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 STAT3P40763 770 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 NT5C2P49902 561 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 MYL7Q01449 175 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PCNX4Q63HM2 1172 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 TTC7BQ86TV6 843 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 CCDC89Q8N998 374 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PSPC1Q8WXF1 523 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 FAM84BQ96KN1 310 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 THTPAQ9BU02 230 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 YIPF2Q9BWQ6 316 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 MAK16Q9BXY0 300 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 IQCGQ9H095 443 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 MANSC1Q9H8J5 431 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 VPS37BQ9H9H4 285 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 DDX18Q9NVP1 670 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 SCN7AQ01118 1682 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 C2orf71A6NGG8 1288 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 RSPH10B2B2RC85 870 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ERVV-1B6SEH8 477 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 FCHO1O14526 889 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 MTA2O94776 668 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 RSPH10BP0C881 870 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 UQCRBP14927 111 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 IL6STP40189 918 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ACTR3P61158 418 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 SULT2A1Q06520 285 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 GRM2Q14416 872 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 DUS1LQ6P1R4 473 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 NSMFQ6X4W1 530 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 RBM44Q6ZP01 1051 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PDSS2Q86YH6 399 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 SLC5A5Q92911 643 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 CLPTM1LQ96KA5 538 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 RUSC1Q9BVN2 902 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 IKZF4Q9H2S9 585 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 EPB41L1Q9H4G0 881 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 UBE2TQ9NPD8 197 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 DNM3Q9UQ16 869 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 SH3GLB1Q9Y371 365 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 SPATA31A1Q5TZJ5 1347 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 FRMPD2Q68DX3 1309 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 TMEM221A6NGB7 291 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 UBAP1LF5GYI3 381 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 hCG_1984214I3L0E3 225 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 TXNDC9O14530 226 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 BUD23O43709 281 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ENO1P06733 434 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 SMARCA1P28370 1054 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 GALK1P51570 392 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 PSMC6P62333 389 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 RASA2Q15283 850 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 GSTA5Q7RTV2 222 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF804AQ7Z570 1209 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ULK2Q8IYT8 1036 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ZCCHC9Q8N567 271 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 SLC25A41Q8N5S1 370 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF713Q8N859 430 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 OXNAD1Q96HP4 312 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 FAM118BQ9BPY3 351 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 RMI1Q9H9A7 625 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 R3HDM2Q9Y2K5 976 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 BTBD19C9JJ37 291 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 VILLO15195 856 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 TGFB1I1O43294 461 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 FKBP6O75344 327 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 TBCAO75347 108 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 TM7SF2O76062 418 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 VCLP18206 1134 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 EIF4BP23588 611 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ARL4CP56559 192 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 PDK3Q15120 406 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 BMT2Q1RMZ1 405 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 MMEL1Q495T6 779 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 SFT2D3Q587I9 215 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 INTS5Q6P9B9 1019 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.62□□□□□ -1.193e-12■□□□□ 9.4
CSDE1-201ENST00000261443 RBM15BQ8NDT2 890 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 CEP70Q8NHQ1 597 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 TCP10LQ8TDR4 215 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 IRGQQ8WZA9 623 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms