RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 ZBED4O75132 1171 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 CBX6O95503 412 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 WLSQ5T9L3 541 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 PAXIP1Q6ZW49 1069 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 RBBP8NLQ8NC74 664 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 MIEF2Q96C03 454 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 TMEM109Q9BVC6 243 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 AGO2Q9UKV8 859 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 MROH7Q68CQ1 1323 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 UPP2O95045 317 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 PECAM1P16284 738 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 FOXN2P32314 431 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 GPC3P51654 580 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 GLIS1Q8NBF1 620 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 PYROXD1Q8WU10 500 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 ATP6V0A1Q93050 837 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 MSTO1Q9BUK6 570 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 GINM1Q9NU53 330 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 JAK3P52333 1124 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 RAD23BP54727 409 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 RPL7AP62424 266 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 BASP1P80723 227 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 FAM151AQ8WW52 585 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 C12orf65Q9H3J6 166 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
SNCAIP-202ENST00000261368 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 K7ERI5 159 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 CCNE2O96020 404 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 CCND1P24385 295 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 KRT76Q01546 638 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 CYP4A22Q5TCH4 519 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 RFX8Q6ZV50 586 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 CTAGE3PQ8IX95 158 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 PCSK1NQ9UHG2 260 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 CDK5RAP2Q96SN8 1893 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 TJP3O95049 919 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 KRT19P08727 400 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 LVRNQ6Q4G3 990 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 SYDE1Q6ZW31 735 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 CENPUQ71F23 418 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 ANO5Q75V66 913 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 NUDCD1Q96RS6 583 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 KRT4P19013 534 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 NLRP11P59045 1033 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 BNIP1Q12981 228 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 KCNT1Q5JUK3 1230 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 TARS2Q9BW92 718 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 IQCGQ9H095 443 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 NXF1Q9UBU9 619 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-202ENST00000261368 TAC1P20366 129 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 DSG3P32926 999 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 LMNB2Q03252 620 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 CCNG2Q16589 344 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 MAP4K3Q8IVH8 894 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 PPP1R12CQ9BZL4 782 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 TROVE2P10155 538 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 TCF4P15884 667 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 CENPCQ03188 943 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 MKRN3Q13064 507 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 TRPC3Q13507 836 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 RHPN2Q8IUC4 686 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 MCUR1Q96AQ8 359 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 RNF146Q9NTX7 359 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 ZFP69BQ9UJL9 534 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 BTAF1O14981 1849 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 MTA2O94776 668 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 MTFR1Q15390 333 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 C4orf19Q8IY42 314 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 VPS52Q8N1B4 723 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 IVNS1ABPQ9Y6Y0 642 aa17.1■□□□□ 0.33
SNCAIP-202ENST00000261368 A0A1W2PPM1 405 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 F8VP50 259 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 MYBL1P10243 752 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 SSTR1P30872 391 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 PGM5Q15124 567 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 SCYL3Q8IZE3 742 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 CALN1Q9BXU9 219 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 YIPF3Q9GZM5 350 aa17.09■□□□□ 0.33
SNCAIP-202ENST00000261368 TRPC5Q9UL62 973 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms