RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SRGNP10124 158 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ENO3P13929 434 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 TCN1P20061 433 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 IL10P22301 178 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 DMC1Q14565 340 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 SLC18A3Q16572 532 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 RAB42Q8N4Z0 105 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ARHGEF26Q96DR7 871 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 GGA3Q9NZ52 723 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF197O14709 1029 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 OR1G1P47890 313 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 CSE1LP55060 971 aaKnown RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 STK4Q13043 487 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 MAPRE2Q15555 327 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 SGSM1Q2NKQ1 1148 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 SEZ6Q53EL9 994 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 CDR2LQ86X02 465 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 COG1Q8WTW3 980 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 BHMTQ93088 406 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF512Q96ME7 567 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 WWP1Q9H0M0 922 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 CDV3Q9UKY7 258 aaKnown RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 GTF2H1P32780 548 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 SGO1Q5FBB7 561 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 LSM7Q9UK45 103 aaKnown RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 PKP3Q9Y446 797 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 A0A1B0GTH6 734 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 PHF20L1A8MW92 1017 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 NDUFS3O75489 264 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 ALDH1A1P00352 501 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 AARS2Q5JTZ9 985 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 STRIP1Q5VSL9 837 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 OR9Q1Q8NGQ5 310 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 CELF4Q9BZC1 486 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 GOLPH3Q9H4A6 298 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 IL1RL2Q9HB29 575 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 C2CD2LO14523 706 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 TRAPPC3O43617 180 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 NR3C2P08235 984 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 PTK7Q13308 1070 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 R3HDM1Q15032 1099 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 PDHBP11177 359 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 SNAPC2Q13487 334 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 RARS2Q5T160 578 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 MTHFD1LQ6UB35 978 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 PATL1Q86TB9 770 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 CCDC33Q8N5R6 958 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 HIST1H2AHQ96KK5 128 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 MED15Q96RN5 788 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 HIST1H2AJQ99878 128 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 H2AFJQ9BTM1 129 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 V9GYQ6 96 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 TARSL2A2RTX5 802 aaKnown RBP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 FDX1P10109 184 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL8A1-201ENST00000261037 TWF1Q12792 350 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 C16orf86Q6ZW13 317 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 SEPT1Q8WYJ6 367 aa12.68□□□□□ -0.38
COL8A1-201ENST00000261037 C6orf10Q5SRN2 563 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 KLK14Q9P0G3 267 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 IQCA1LA6NCM1 817 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 AKAP10O43572 662 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 MYL2P10916 166 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 KRT4P19013 534 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 COMTP21964 271 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 AVPR1AP37288 418 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 TMEM161AQ9NX61 479 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF200P98182 395 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF473Q8WTR7 871 aaKnown RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 CYGBQ8WWM9 190 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 TIPINQ9BVW5 301 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 LATS2Q9NRM7 1088 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 RAD51CO43502 376 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 RASA1P20936 1047 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 STX3Q13277 289 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 USP49Q70CQ1 688 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 SCFD1Q8WVM8 642 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms