RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 RSPO2Q6UXX9 243 aaPredicted RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 SPATA31D4Q6ZUB0 917 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 CBWD2Q8IUF1 395 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 BRSK2Q8IWQ3 736 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 EFCAB13Q8IY85 973 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 GPR65Q8IYL9 337 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PIK3R5Q8WYR1 880 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 IPO9Q96P70 1041 aaKnown RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 S1PR5Q9H228 398 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 KCTD10Q9H3F6 313 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PDE11AQ9HCR9 933 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.23□□□□□ -0.932e-7■□□□□ 10.3
TMEM258-201ENST00000257262 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 C2CD2Q9Y426 696 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 PCDHGA10Q9Y5H3 936 aa9.23□□□□□ -0.93
TMEM258-201ENST00000257262 MTCL1Q9Y4B5 1905 aaKnown RBP9.23□□□□□ -0.93
TMEM258-201ENST00000257262 MYO7AQ13402 2215 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 ANO9A1A5B4 782 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 PDXKO00764 312 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 ADAM12O43184 909 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 CYP2J2P51589 502 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 CREMQ03060 361 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 SNRNP35Q16560 246 aaKnown RBP9.22□□□□□ -0.93
TMEM258-201ENST00000257262 SCARA3Q6AZY7 606 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 PDXDC1Q6P996 788 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 LILRA6Q6PI73 481 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 DSTYKQ6XUX3 929 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 HS2ST1Q7LGA3 356 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 NT5DC4Q86YG4 428 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 C12orf56Q8IXR9 622 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 C12orf76Q8N812 135 aaPredicted RBP9.22□□□□□ -0.93
TMEM258-201ENST00000257262 XXYLT1Q8NBI6 393 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 SMRP1Q8NCR6 262 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 SUSD3Q96L08 255 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 FBXL18Q96ME1 805 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 GSDMAQ96QA5 445 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 EPAS1Q99814 870 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 KIAA1586Q9HCI6 787 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 CGNQ9P2M7 1197 aaKnown RBP9.22□□□□□ -0.93
TMEM258-201ENST00000257262 MTRRQ9UBK8 725 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 PCDHA5Q9Y5H7 936 aa9.22□□□□□ -0.93
TMEM258-201ENST00000257262 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
TMEM258-201ENST00000257262 M0QZQ0 153 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SYN3O14994 580 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SPTLC1O15269 473 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 TGM5O43548 720 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 HRO43593 1189 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 CALUO43852 315 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 EXOC3O60645 756 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 KIF20AO95235 890 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 GLUD1P00367 558 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ITGB3P05106 788 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 HOXB8P17481 243 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 OR1D2P34982 312 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 LILRA4P59901 499 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 UBE2HP62256 183 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 TFAMQ00059 246 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 MRPL58Q14197 206 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SURF1Q15526 300 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SMAD2Q15796 467 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 RARS2Q5T160 578 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ZNF658Q5TYW1 1059 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 LMBRD2Q68DH5 695 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ISM2Q6H9L7 571 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ANKS3Q6ZW76 656 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ELOA2Q8IYF1 753 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 GUF1Q8N442 669 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 C1orf127Q8N9H9 656 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SPATA20Q8TB22 786 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 GOLGA5Q8TBA6 731 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 FEZF2Q8TBJ5 459 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 CACTINQ8WUQ7 758 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 SMARCE1Q969G3 411 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 FAM84AQ96KN4 292 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 NECAB3Q96P71 396 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 UHRF1Q96T88 793 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 POP1Q99575 1024 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ADAM7Q9H2U9 754 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 DZANK1Q9NVP4 752 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 DMAC2Q9NW81 257 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 RMND1Q9NWS8 449 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 CDH22Q9UJ99 828 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 HOOK1Q9UJC3 728 aaKnown RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 TRAF3IP3Q9Y228 551 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 FAM50BQ9Y247 325 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 USP15Q9Y4E8 981 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 TIMM13Q9Y5L4 95 aaPredicted RBP9.21□□□□□ -0.94
TMEM258-201ENST00000257262 BACE2Q9Y5Z0 518 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 CDY1Q9Y6F8 540 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 PTPRJQ12913 1337 aa9.21□□□□□ -0.94
TMEM258-201ENST00000257262 CCDC195A0A1B0GUA6 201 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms