RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TMEM134Q9H6X4 195 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 EFCC1Q9HA90 598 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 TBK1Q9UHD2 729 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 SLC15A5A6NIM6 579 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 CACYBPQ9HB71 228 aaKnown RBP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 HGSO14964 777 aaPredicted RBP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 SETSIPP0DME0 302 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 ARSEP51690 589 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 GOLGA7BQ2TAP0 167 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 PHLDB3Q6NSJ2 640 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 C1orf54Q8WWF1 131 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 TMEM117Q9H0C3 514 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 TMEM51Q9NW97 253 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 AFDNP55196 1824 aaKnown RBP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 THPOP40225 353 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 GRIK4Q16099 956 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 COBLL1Q53SF7 1204 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 SPOPLQ6IQ16 392 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 CAMKK2Q96RR4 588 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 AIPL1Q9NZN9 384 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 LSM7Q9UK45 103 aaKnown RBP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 LRRC10BA6NIK2 292 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 MDM2Q00987 491 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-201ENST00000253251 EFHBQ8N7U6 833 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 TPCN2Q8NHX9 752 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 ARHGEF26Q96DR7 871 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 SMYD2Q9NRG4 433 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 AAASQ9NRG9 546 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 AMACRQ9UHK6 382 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 KPNA7A9QM74 516 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 F8VZ95 297 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 PDGFRBP09619 1106 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 GCNT1Q02742 428 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 DEUP1Q05D60 604 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 AP1B1Q10567 949 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 GBP7Q8N8V2 638 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-201ENST00000253251 SKA2Q8WVK7 121 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-201ENST00000253251 KLRG1Q96E93 195 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 PI4K2AQ9BTU6 479 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 POLIQ9UNA4 740 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 PCDHB7Q9Y5E2 793 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 SPEF2Q9C093 1822 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 RASA4BC9J798 803 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 RASA4O43374 803 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 SPAG6O75602 509 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 CYP11B1P15538 503 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 RGS7P49802 495 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 LRIG3Q6UXM1 1119 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 C1orf186Q6ZWK4 172 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 REXO1L1PQ8IX06 675 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 IRX2Q9BZI1 471 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-201ENST00000253251 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
UBE4B-201ENST00000253251 H7C4K7 107 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 PDIA2Q13087 525 aaKnown RBP15.79■□□□□ 0.12
UBE4B-201ENST00000253251 HIF1AQ16665 826 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 CEP120Q8N960 986 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 USP38Q8NB14 1042 aa15.79■□□□□ 0.12
UBE4B-201ENST00000253251 DCDC2CA8MYV0 355 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 EML1O00423 815 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 SLC2A3P11169 496 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 FNTAP49354 379 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 PSMD6Q15008 389 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 SV2AQ7L0J3 742 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 HAS1Q92839 578 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 ATP6V1E2Q96A05 226 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 PAK5Q9P286 719 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 A0A087X0T9 212 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 LYPLA2O95372 231 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 FAM228BP0C875 321 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 HSPA8P11142 646 aaKnown RBP15.78■□□□□ 0.12
UBE4B-201ENST00000253251 RTP1P59025 263 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 DRP2Q13474 957 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 ACVR2BQ13705 512 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 PDK1Q15118 436 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.78■□□□□ 0.12
UBE4B-201ENST00000253251 MTMR12Q9C0I1 747 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 LY6KQ17RY6 165 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 PID1Q7Z2X4 250 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 BRSK2Q8IWQ3 736 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 DUSP9Q99956 384 aaKnown RBP15.78■□□□□ 0.12
UBE4B-201ENST00000253251 SIK2Q9H0K1 926 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 CATSPERBQ9H7T0 1116 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 TTC7AQ9ULT0 858 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-201ENST00000253251 AHDC1Q5TGY3 1603 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-201ENST00000253251 A0A087WZ62 844 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 A0A087X0B3 334 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 FBXO21O94952 628 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 LHX1P48742 406 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 HYIQ5T013 277 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 FDXACB1Q9BRP7 624 aaPredicted RBP15.78■□□□□ 0.12
UBE4B-201ENST00000253251 LRRC1Q9BTT6 524 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 TXLNGQ9NUQ3 528 aa15.78■□□□□ 0.12
UBE4B-201ENST00000253251 CHEK2O96017 543 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 F9P00740 461 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 CYBBP04839 570 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 CNTN2Q02246 1040 aa15.77■□□□□ 0.12
UBE4B-201ENST00000253251 ZNF235Q14590 738 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms