RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 SF3B4Q15427 424 aaKnown RBP eCLIP14.05□□□□□ -0.161e-15■■■■■ 68.6
COLGALT1-201ENST00000252599 PCNX4Q63HM2 1172 aa14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 UNC5DQ6UXZ4 953 aa14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 ZNF333Q96JL9 665 aa14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 AIFM2Q9BRQ8 373 aa14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 RAD21L1Q9H4I0 556 aa14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 TMBIM4Q9HC24 238 aa14.05□□□□□ -0.16
COLGALT1-201ENST00000252599 MAPK13O15264 365 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 BUB1O43683 1085 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 NDUFA10O95299 355 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 RARAP10276 462 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 CYP2D6P10635 497 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 PRDX5P30044 214 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 ENTPD1P49961 510 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 HSD17B4P51659 736 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 OLR1P78380 273 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 KDSRQ06136 332 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 PTGDRQ13258 359 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 TTLL12Q14166 644 aaPredicted RBP14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 ARSHQ5FYA8 562 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 CLVS2Q5SYC1 327 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 TMTC3Q6ZXV5 915 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 LPCAT2Q7L5N7 544 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 METTL16Q86W50 562 aaKnown RBP14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 CLK4Q9HAZ1 481 aaKnown RBP14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 NLRC4Q9NPP4 1024 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 SACM1LQ9NTJ5 587 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 RAB19A4D1S5 217 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 LMNB2Q03252 620 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 NIPAL4Q0D2K0 466 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 RSBN1Q5VWQ0 802 aaPredicted RBP14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 SPARTQ8N0X7 666 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 FAM13CQ8NE31 585 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 EXD1Q8NHP7 514 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 MCRS1Q96EZ8 462 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 OTUD5Q96G74 571 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 EDARQ9UNE0 448 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 CARNS1A5YM72 827 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 F8W810 466 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 ASAP2O43150 1006 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 GAS7O60861 476 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 CDK4P11802 303 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 CLK1P49759 484 aaKnown RBP14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 SCNN1DP51172 638 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 PHC1P78364 1004 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 FMR1Q06787 632 aaKnown RBP eCLIP14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 KCTD2Q14681 263 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 ZNF423Q2M1K9 1284 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 FAM196AQ6ZSG2 479 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 SFR1Q86XK3 245 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 ADSSL1Q8N142 457 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 NUP93Q8N1F7 819 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
COLGALT1-201ENST00000252599 C1orf232A0A0U1RR37 186 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 HAT1O14929 419 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 CIAO1O76071 339 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 CAND1Q86VP6 1230 aaKnown RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 MRRFQ96E11 262 aaKnown RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 TCF12Q99081 682 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 CUEDC2Q9H467 287 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 SOS2Q07890 1332 aaPredicted RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 E2F3O00716 465 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 ASPHQ12797 758 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 KCTD19Q17RG1 926 aaPredicted RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 DOK7Q18PE1 504 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 SNRNP48Q6IEG0 339 aaKnown RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 ZNF366Q8N895 744 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 WNK4Q96J92 1243 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 C17orf80Q9BSJ5 609 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 ABCG4Q9H172 646 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 LIN28AQ9H9Z2 209 aaKnown RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 GPR108Q9NPR9 543 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 GPRC5DQ9NZD1 345 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 A0A1W2PQ72 361 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 GOLGA8SH3BPF8 625 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 IDH3BO43837 385 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 RNASEH2AO75792 299 aaKnown RBP14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 FCHO2Q0JRZ9 810 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 DSC3Q14574 896 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 C1orf146Q5VVC0 180 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 CCDC28AQ8IWP9 274 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 PJA1Q8NG27 643 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 TTC25Q96NG3 672 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 THAP1Q9NVV9 213 aa14.03□□□□□ -0.16
COLGALT1-201ENST00000252599 PXDNLA1KZ92 1463 aa14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 APOA4P06727 396 aa14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 SERPINB1P30740 379 aa14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 CUL1Q13616 776 aa14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 BYSLQ13895 437 aaKnown RBP14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 PTK2BQ14289 1009 aa14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 GSTA3Q16772 222 aa14.02□□□□□ -0.16
COLGALT1-201ENST00000252599 PXDC1Q5TGL8 231 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms