RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SHDQ96IW2 340 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 KXD1Q9BQD3 176 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 OSBPL6Q9BZF3 934 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 KMT5AQ9NQR1 393 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 POLIQ9UNA4 740 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 R4GN57 208 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 DENND4CQ5VZ89 1909 aa11.28□□□□□ -0.6
VPS50-201ENST00000251739 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.6
VPS50-201ENST00000251739 TPRP12270 2363 aaKnown RBP11.27□□□□□ -0.6
VPS50-201ENST00000251739 SLC16A4O15374 487 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 FAM189A1O60320 539 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 SEC24AO95486 1093 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 LMNAP02545 664 aaKnown RBP11.27□□□□□ -0.61
VPS50-201ENST00000251739 SP9P0CG40 484 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 PLS3P13797 630 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 CEBPBP17676 345 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 RFX1P22670 979 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 SLC12A3P55017 1021 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 FOXK2Q01167 660 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 MCL1Q07820 350 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 SLC10A6Q3KNW5 377 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 TMEM119Q4V9L6 283 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 SPECC1Q5M775 1068 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 TPGS2Q68CL5 300 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 ZPBP2Q6X784 338 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 DTHD1Q6ZMT9 781 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
VPS50-201ENST00000251739 ACAP3Q96P50 834 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 HAPLN2Q9GZV7 340 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 LTB4R2Q9NPC1 389 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
VPS50-201ENST00000251739 INSL5Q9Y5Q6 135 aa11.27□□□□□ -0.61
VPS50-201ENST00000251739 TTC26A0AVF1 554 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 M0QZQ0 153 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 MICAL2O94851 1124 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 VNN2O95498 520 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 CCR2P41597 374 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 AARSP49588 968 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS50-201ENST00000251739 EPHA5P54756 1037 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 NCKAP1LP55160 1127 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 PFKPQ01813 784 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 SNW1Q13573 536 aaKnown RBP11.26□□□□□ -0.61
VPS50-201ENST00000251739 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 ZNF528Q3MIS6 628 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 SLC44A4Q53GD3 710 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 ARSHQ5FYA8 562 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 SYT2Q8N9I0 419 aaPredicted RBP11.26□□□□□ -0.61
VPS50-201ENST00000251739 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 LRRC15Q8TF66 581 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 NELL1Q92832 810 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 CLDN23Q96B33 292 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 TCEAL4Q96EI5 215 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 PLA2G2FQ9BZM2 168 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 KCND2Q9NZV8 630 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 TUBGCP4Q9UGJ1 667 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 MTF2Q9Y483 593 aaPredicted RBP11.26□□□□□ -0.61
VPS50-201ENST00000251739 TCHHQ07283 1943 aa11.26□□□□□ -0.61
VPS50-201ENST00000251739 OBSL1O75147 1896 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 H7C4K7 107 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 RNF40O75150 1001 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 MOSPD3O75425 235 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 PIGRP01833 764 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 LRG1P02750 347 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ADRB2P07550 413 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 CXCL8P10145 99 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 HARSP12081 509 aaKnown RBP11.25□□□□□ -0.61
VPS50-201ENST00000251739 PTPN2P17706 415 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 LRPAP1P30533 357 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 MAGEA9P43362 315 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 FZD5Q13467 585 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 RABEP1Q15276 862 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 SEZ6Q53EL9 994 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
VPS50-201ENST00000251739 TANGO2Q6ICL3 276 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ZNF280DQ6N043 979 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ZC3H14Q6PJT7 736 aaKnown RBP11.25□□□□□ -0.61
VPS50-201ENST00000251739 TMEM130Q8N3G9 435 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 SUMF1Q8NBK3 374 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 DNASE1L2Q92874 299 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ELSPBP1Q96BH3 223 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 MCRS1Q96EZ8 462 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 TCHPQ9BT92 498 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 CEP72Q9P209 647 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ANKFY1Q9P2R3 1169 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 AFF4Q9UHB7 1163 aaKnown RBP11.25□□□□□ -0.61
VPS50-201ENST00000251739 FBXO4Q9UKT5 387 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 MAFFQ9ULX9 164 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 NUB1Q9Y5A7 615 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 NCANO14594 1321 aa11.25□□□□□ -0.61
VPS50-201ENST00000251739 ACACBO00763 2458 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 PRRG1O14668 218 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 SLC26A4O43511 780 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 OAZ2O95190 189 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 CD2BP2O95400 341 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms