RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 RDM1Q8NG50 284 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 PDE4DIPQ5VU43 2346 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 C3orf70A6NLC5 250 aaPredicted RBP9.05□□□□□ -0.96
USP6-201ENST00000250066 TNPO2O14787 897 aaKnown RBP9.05□□□□□ -0.96
USP6-201ENST00000250066 ZBTB39O15060 712 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 PSMD3O43242 534 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 CYBBP04839 570 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 GNA15P30679 374 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 ARF3P61204 181 aaPredicted RBP9.05□□□□□ -0.96
USP6-201ENST00000250066 ARF1P84077 181 aaKnown RBP9.05□□□□□ -0.96
USP6-201ENST00000250066 RBBP4Q09028 425 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 MAPK6Q16659 721 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 ZNF438Q7Z4V0 828 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 IL1RAPL1Q9NZN1 696 aa9.05□□□□□ -0.96
USP6-201ENST00000250066 POU1F1P28069 291 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 GTF2E2P29084 291 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 OTUD4Q01804 1114 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 TAP1Q03518 808 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 GCKRQ14397 625 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 FAM102AQ5T9C2 384 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 IZUMO3Q5VZ72 239 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 SDE2Q6IQ49 451 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 TAF2Q6P1X5 1199 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 CYP4Z1Q86W10 505 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 VSTM4Q8IW00 320 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 SLC44A2Q8IWA5 706 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 RHOT1Q8IXI2 618 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 GSPT2Q8IYD1 628 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 ZBTB10Q96DT7 871 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 CCDC17Q96LX7 622 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 RPS6KB2Q9UBS0 482 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 MTO1Q9Y2Z2 717 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 ZNF24P17028 368 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 VHLP40337 213 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 OTOAQ7RTW8 1153 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 NT5DC4Q86YG4 428 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 LRRC71Q8N4P6 559 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 OTUD7AQ8TE49 926 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 MTMR6Q9Y217 621 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 KDM5BQ9UGL1 1544 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 ATP5JP18859 108 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 QARSP47897 775 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 CYP4Z2PQ8N1L4 340 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 AGAP3Q96P47 875 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 RNF26Q9BY78 433 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 C6orf62Q9GZU0 229 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 SIK3Q9Y2K2 1263 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 GRID2IPA4D2P6 1211 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 TBKBP1A7MCY6 615 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 BTN3A3O00478 584 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 DDHD2O94830 711 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 FGAP02671 866 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 ZNF23P17027 643 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 USP14P54578 494 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 NPEPPSP55786 919 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 TWF1Q12792 350 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 CAMK1Q14012 370 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 TCEAL5Q5H9L2 206 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 CDC73Q6P1J9 531 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 TRIM72Q6ZMU5 477 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 TRIM48Q8IWZ4 208 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 POLR3EQ9NVU0 708 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 PPIP5K1Q6PFW1 1433 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 ADGRA3Q8IWK6 1321 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 RNMTO43148 476 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 DGKIO75912 1065 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 BCL10O95999 233 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 CLTBP09497 229 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 FGFR4P22455 802 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 EIF3EP60228 445 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 ORC2Q13416 577 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 HIST2H2ACQ16777 129 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 HIST2H2AA3Q6FI13 130 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 RBBP8NLQ8NC74 664 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 XPO7Q9UIA9 1087 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 H3BMM5 538 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 EIF3HO15372 352 aaKnown RBP eCLIP9.04□□□□□ -0.96
USP6-201ENST00000250066 MOCS2O96007 188 aaPredicted RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 ATP1A1P05023 1023 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
USP6-201ENST00000250066 DDR2Q16832 855 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 LAYNQ6UX15 382 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 VPS33AQ96AX1 596 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 SLITRK2Q9H156 845 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 DAPK2Q9UIK4 370 aa9.04□□□□□ -0.96
USP6-201ENST00000250066 ACADSP16219 412 aa9.03□□□□□ -0.96
USP6-201ENST00000250066 GPC1P35052 558 aa9.03□□□□□ -0.96
USP6-201ENST00000250066 CTCFP49711 727 aaPredicted RBP9.03□□□□□ -0.96
USP6-201ENST00000250066 TPI1P60174 286 aa9.03□□□□□ -0.96
USP6-201ENST00000250066 DPYDQ12882 1025 aa9.03□□□□□ -0.96
USP6-201ENST00000250066 RALGDSQ12967 914 aa9.03□□□□□ -0.96
USP6-201ENST00000250066 USP10Q14694 798 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms