RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PROSCO94903 275 aa23.08■■□□□ 1.28
CLN6-201ENST00000249806 SLC1A1P43005 524 aa23.08■■□□□ 1.28
CLN6-201ENST00000249806 SNX1Q13596 522 aa23.08■■□□□ 1.28
CLN6-201ENST00000249806 ZNF568Q3ZCX4 644 aa23.08■■□□□ 1.28
CLN6-201ENST00000249806 TMEM192Q8IY95 271 aa23.08■■□□□ 1.28
CLN6-201ENST00000249806 C1orf131Q8NDD1 294 aaKnown RBP23.08■■□□□ 1.28
CLN6-201ENST00000249806 DDX27Q96GQ7 796 aaKnown RBP23.08■■□□□ 1.28
CLN6-201ENST00000249806 HMGB1P1B2RPK0 211 aaPredicted RBP23.07■■□□□ 1.28
CLN6-201ENST00000249806 POTEJP0CG39 1038 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 NR1D1P20393 614 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 SLC26A2P50443 739 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 PDCLQ13371 301 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 SGSM1Q2NKQ1 1148 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 TMEM130Q8N3G9 435 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 PPP1R16BQ96T49 567 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 PLVAPQ9BX97 442 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 LRRC19Q9H756 370 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 CISHQ9NSE2 258 aa23.07■■□□□ 1.28
CLN6-201ENST00000249806 IVLP07476 585 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 SNAPC2Q13487 334 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 TRPC3Q13507 836 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 SGO2Q562F6 1265 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 PLEKHA7Q6IQ23 1121 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 SCARA5Q6ZMJ2 495 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 KDM7AQ6ZMT4 941 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 VCPIP1Q96JH7 1222 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 L3MBTL3Q96JM7 780 aaPredicted RBP23.06■■□□□ 1.28
CLN6-201ENST00000249806 JPH2Q9BR39 696 aaPredicted RBP23.06■■□□□ 1.28
CLN6-201ENST00000249806 CHST7Q9NS84 486 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 TLR3O15455 904 aaKnown RBP23.06■■□□□ 1.28
CLN6-201ENST00000249806 BRD2P25440 801 aaKnown RBP23.06■■□□□ 1.28
CLN6-201ENST00000249806 TAS2R40P59535 323 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 PPARDQ03181 441 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 MBTD1Q05BQ5 628 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 TFDP1Q14186 410 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 LDLRAD1Q5T700 205 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 C12orf50Q8NA57 414 aaPredicted RBP23.06■■□□□ 1.28
CLN6-201ENST00000249806 ATG4AQ8WYN0 398 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 SLC10A4Q96EP9 437 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 EPB41L4BQ9H329 900 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 MRPL47Q9HD33 250 aaKnown RBP23.06■■□□□ 1.28
CLN6-201ENST00000249806 BCCIPQ9P287 314 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLN6-201ENST00000249806 USTQ9Y2C2 406 aa23.06■■□□□ 1.28
CLN6-201ENST00000249806 ASB14A6NK59 587 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 ERLIN2O94905 339 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 TMEM191BP0C7N4 346 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 INSRRP14616 1297 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 RPL7AP62424 266 aaKnown RBP23.05■■□□□ 1.28
CLN6-201ENST00000249806 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 NIF3L1Q9GZT8 377 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 ERAP1Q9NZ08 941 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 CWC15Q9P013 229 aaKnown RBP23.05■■□□□ 1.28
CLN6-201ENST00000249806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.05■■□□□ 1.28
CLN6-201ENST00000249806 EIF3HO15372 352 aaKnown RBP eCLIP23.05■■□□□ 1.28
CLN6-201ENST00000249806 C22orf31O95567 290 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 HPDP32754 393 aaPredicted RBP23.05■■□□□ 1.28
CLN6-201ENST00000249806 FNTAP49354 379 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 GUCY1A3Q02108 690 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 C1QBPQ07021 282 aaKnown RBP23.05■■□□□ 1.28
CLN6-201ENST00000249806 HEMGNQ9BXL5 484 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 XYLT2Q9H1B5 865 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 IFT122Q9HBG6 1241 aa23.05■■□□□ 1.28
CLN6-201ENST00000249806 ANK1P16157 1881 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 CXCL8P10145 99 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 MMP8P22894 467 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 MKRN3Q13064 507 aaKnown RBP23.04■■□□□ 1.28
CLN6-201ENST00000249806 SURF1Q15526 300 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 TAPT1Q6NXT6 567 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 CDT1Q9H211 546 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 PPFIA4O75335 1185 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 GJC1P36383 396 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 SSR1P43307 286 aaKnown RBP23.04■■□□□ 1.28
CLN6-201ENST00000249806 PMS2P54278 862 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 ZNF699Q32M78 642 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 EMC10Q5UCC4 262 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 CCDC50Q8IVM0 306 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 SHCBP1Q8NEM2 672 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 FEZF2Q8TBJ5 459 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 TFAP2BQ92481 460 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 ZNF408Q9H9D4 720 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 PARVAQ9NVD7 372 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 NXF1Q9UBU9 619 aaKnown RBP23.04■■□□□ 1.28
CLN6-201ENST00000249806 RSPH14Q9UHP6 348 aa23.04■■□□□ 1.28
CLN6-201ENST00000249806 GPR25O00155 361 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 ZEB2O60315 1214 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 ECEL1O95672 775 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 SHBGP04278 402 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 LGALS2P05162 132 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 ADORA2AP29274 412 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 ASPAP45381 313 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 PPP1R7Q15435 360 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 UBAP2Q5T6F2 1119 aaKnown RBP23.03■■□□□ 1.28
CLN6-201ENST00000249806 RUFY4Q6ZNE9 571 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 GPRC5AQ8NFJ5 357 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.03■■□□□ 1.28
CLN6-201ENST00000249806 POLIQ9UNA4 740 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 SCINQ9Y6U3 715 aa23.03■■□□□ 1.28
CLN6-201ENST00000249806 B4GALT4O60513 344 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 KRT19P08727 400 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 RALAP11233 206 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms