RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 AGAP1Q9UPQ3 857 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
LSM8-201ENST00000249299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.88□□□□□ -0.19
LSM8-201ENST00000249299 SERPING1P05155 500 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 KRT19P08727 400 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 SKILP12757 684 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 TUSC3Q13454 348 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 RAPGEF1Q13905 1077 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 SV2CQ496J9 727 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 IRF2BP2Q7Z5L9 587 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 ARHGEF19Q8IW93 802 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 ABI1Q8IZP0 508 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 LPPQ93052 612 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 TATDN2Q93075 761 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 KREMEN1Q96MU8 473 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 DNAI2Q9GZS0 605 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 APOBEC3GQ9HC16 384 aaKnown RBP13.88□□□□□ -0.19
LSM8-201ENST00000249299 NUB1Q9Y5A7 615 aa13.88□□□□□ -0.19
LSM8-201ENST00000249299 RALGAPA2Q2PPJ7 1873 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 MEIS3P2A8K0S8 358 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 TULP1O00294 542 aaPredicted RBP13.87□□□□□ -0.19
LSM8-201ENST00000249299 FOXN3O00409 490 aaPredicted RBP13.87□□□□□ -0.19
LSM8-201ENST00000249299 AMHP03971 560 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 CSF2RAP15509 400 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 ITGB8P26012 769 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 TAF6P49848 677 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 SCNN1GP51170 649 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 TNNC1P63316 161 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 CCZ1BP86790 482 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 CCZ1P86791 482 aaPredicted RBP13.87□□□□□ -0.19
LSM8-201ENST00000249299 DSC1Q08554 894 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 LRMPQ12912 555 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 WDR72Q3MJ13 1102 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 GLRA4Q5JXX5 417 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 LIMS2Q7Z4I7 341 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 TMEM139Q8IV31 216 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 RNF169Q8NCN4 708 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 C18orf25Q96B23 403 aaPredicted RBP13.87□□□□□ -0.19
LSM8-201ENST00000249299 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 GPR88Q9GZN0 384 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 RNF19AQ9NV58 838 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 TUBGCP4Q9UGJ1 667 aa13.87□□□□□ -0.19
LSM8-201ENST00000249299 KPNA7A9QM74 516 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 TACC1O75410 805 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 CYLC1P35663 651 aaPredicted RBP13.86□□□□□ -0.19
LSM8-201ENST00000249299 ASPAP45381 313 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.194e-6■■■□□ 17.5
LSM8-201ENST00000249299 LILRA4P59901 499 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 APBA1Q02410 837 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 FPGSQ05932 587 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 SOX4Q06945 474 aaPredicted RBP13.86□□□□□ -0.19
LSM8-201ENST00000249299 KLHL30Q0D2K2 578 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 INCA1Q0VD86 236 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 ASIC2Q16515 512 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 UPP1Q16831 310 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 CLLU1OSQ5K130 101 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 PSRC1Q6PGN9 363 aaPredicted RBP13.86□□□□□ -0.19
LSM8-201ENST00000249299 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 MAMSTRQ6ZN01 415 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 ZNF677Q86XU0 584 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 UBR7Q8N806 425 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 MIOSQ9NXC5 875 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 KIAA1257Q9ULG3 409 aa13.86□□□□□ -0.19
LSM8-201ENST00000249299 CITO14578 2027 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 PODXLO00592 558 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 EVI5O60447 810 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 LRRN2O75325 713 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 PAEPP09466 180 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 ACO1P21399 889 aaKnown RBP13.85□□□□□ -0.19
LSM8-201ENST00000249299 ZNF132P52740 706 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 ARHGAP44Q17R89 818 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 TMEM86AQ8N2M4 240 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 TXLNBQ8N3L3 684 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 TOP6BLQ8N6T0 577 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 CCDC42Q96M95 316 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 CASD1Q96PB1 797 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 KCNF1Q9H3M0 494 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 KCND1Q9NSA2 647 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 DSEQ9UL01 958 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 ZKSCAN5Q9Y2L8 839 aa13.85□□□□□ -0.19
LSM8-201ENST00000249299 CCP110O43303 1012 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 DGKIO75912 1065 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 IPO7O95373 1038 aaKnown RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 LCA5LO95447 670 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 FGBP02675 491 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 AFF1P51825 1210 aaKnown RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 PTK2Q05397 1052 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms