RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PIGRP01833 764 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 LSP1P33241 339 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 RAP1GAPP47736 663 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 BPIFB4P59827 614 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 CENPCQ03188 943 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 SLC29A2Q14542 456 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 C1orf131Q8NDD1 294 aaKnown RBP16.77■□□□□ 0.28
LRFN1-201ENST00000248668 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 MINDY3Q9H8M7 445 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.27
LRFN1-201ENST00000248668 CAND2O75155 1236 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 TOM1L1O75674 476 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 CYP1A1P04798 512 aaPredicted RBP16.77■□□□□ 0.27
LRFN1-201ENST00000248668 RALAP11233 206 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 MAP2K2P36507 400 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.27
LRFN1-201ENST00000248668 SKOR1P84550 965 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 KRT17Q04695 432 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 PLCB4Q15147 1175 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 PPP2R5EQ16537 467 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 LRIG3Q6UXM1 1119 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 TADA2BQ86TJ2 420 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 ZNF606Q8WXB4 792 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 PWWP2AQ96N64 755 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 ACO2Q99798 780 aaKnown RBP16.77■□□□□ 0.27
LRFN1-201ENST00000248668 PCYOX1Q9UHG3 505 aa16.77■□□□□ 0.27
LRFN1-201ENST00000248668 ECEL1O95672 775 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 MAMLD1Q13495 774 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 TRPC3Q13507 836 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 ZNF568Q3ZCX4 644 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 CELF3Q5SZQ8 465 aaKnown RBP16.76■□□□□ 0.27
LRFN1-201ENST00000248668 DNAH12Q6ZR08 3092 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
LRFN1-201ENST00000248668 ZBTB8OSQ8IWT0 167 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 PPFIA2O75334 1257 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 HSPA6P17066 643 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 CYP4A22Q5TCH4 519 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 ANKS1BQ7Z6G8 1248 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 MDM1Q8TC05 714 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 EPB41L4BQ9H329 900 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 RNPEPQ9H4A4 650 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 TMEM134Q9H6X4 195 aa16.76■□□□□ 0.27
LRFN1-201ENST00000248668 PTPRFP10586 1907 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 DENND2CQ68D51 928 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 EFCAB12Q6NXP0 572 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 MORC4Q8TE76 937 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 POLIQ9UNA4 740 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 TMEM191BP0C7N4 346 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 TGFB3P10600 412 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 IER5Q5VY09 327 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 DPH6Q7L8W6 267 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 CISHQ9NSE2 258 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 E7EVH7 732 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 CXCL8P10145 99 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 KRT10P13645 584 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 CD19P15391 556 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 MDH1P40925 334 aaKnown RBP16.75■□□□□ 0.27
LRFN1-201ENST00000248668 RUFY4Q6ZNE9 571 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 EFCAB13Q8IY85 973 aa16.75■□□□□ 0.27
LRFN1-201ENST00000248668 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
LRFN1-201ENST00000248668 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 CDH8P55286 799 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ZNF677Q86XU0 584 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 MCEEQ96PE7 176 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 EVPLQ92817 2033 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 PODXLO00592 558 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 OGTO15294 1046 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 FAM189A1O60320 539 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 PROSCO94903 275 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ACSL3O95573 720 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ASS1P00966 412 aaKnown RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 IQCF3P0C7M6 154 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ABCD1P33897 745 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 DDX23Q9BUQ8 820 aaKnown RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 MTRF1LQ9UGC7 380 aaKnown RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ATF7P17544 494 aaPredicted RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 TBXAS1P24557 533 aaPredicted RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 PSMC4P43686 418 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 EFNA5P52803 228 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ADCY2Q08462 1091 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 CALCOCO2Q13137 446 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 CLUL1Q15846 466 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ZNF699Q32M78 642 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 ATF7IP2Q5U623 682 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 EPS8L3Q8TE67 593 aaKnown RBP16.74■□□□□ 0.27
LRFN1-201ENST00000248668 TFAP2BQ92481 460 aa16.74■□□□□ 0.27
LRFN1-201ENST00000248668 FAM167AQ96KS9 214 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms