RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 E9PBE3 544 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 KLHL41O60662 606 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 WDR47O94967 919 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 FOSP01100 380 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 FMO5P49326 533 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MUM1L1Q5H9M0 696 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ACBD5Q5T8D3 534 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 ENGASEQ8NFI3 743 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 TRIM9Q9C026 710 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ATP10DQ9P241 1426 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 PDE2AO00408 941 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 SNX30Q5VWJ9 437 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ZCCHC23Q6ZST2 131 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 DPP9Q86TI2 863 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SCG3Q8WXD2 468 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 SNX13Q9Y5W8 968 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 KRT38O76015 456 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 NSL1Q96IY1 281 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 CNDP1Q96KN2 507 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MINPP1Q9UNW1 487 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 WDR19Q8NEZ3 1342 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 HEG1Q9ULI3 1381 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 IPMKQ8NFU5 416 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 IGDCC4Q8TDY8 1250 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 ZKSCAN4Q969J2 545 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 MRPL1Q9BYD6 325 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 CACNA1GO43497 2377 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 CYP27B1O15528 508 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 COILP38432 576 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 TOB1P50616 345 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 ALDH5A1P51649 535 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 GPSM2P81274 684 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 PPATQ06203 517 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 ZFATQ9P243 1243 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 KCNJ2P63252 427 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 LRRC74AQ0VAA2 488 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 SIX5Q8N196 739 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 NETO2Q8NC67 525 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 IFT43Q96FT9 208 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 RMDN3Q96TC7 470 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 FUCA2Q9BTY2 467 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 TP73O15350 636 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 PPP1R2P3Q6NXS1 205 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 CATSPER4Q7RTX7 472 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 GPR108Q9NPR9 543 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 ZNF277Q9NRM2 450 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 TBC1D23Q9NUY8 699 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 PSMC3IPQ9P2W1 217 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 RBMX2Q9Y388 322 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 ARAP3Q8WWN8 1544 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 C3orf67Q6ZVT6 689 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 ULK4Q96C45 1275 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 RBAKQ9NYW8 714 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 PSAPP07602 524 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 MTMR2Q13614 643 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 CC2D2BQ6DHV5 1058 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 EFHBQ8N7U6 833 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 TMEM35BQ8NCS4 154 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 MIF4GDA9UHW6 222 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 EIF2B2P49770 351 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 RARS2Q5T160 578 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 SGSM3Q96HU1 749 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 CEP290O15078 2479 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 PLEKHG3A1L390 1219 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 KRT75O95678 551 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 RASA2Q15283 850 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 RBBP8NLQ8NC74 664 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 TBC1D22AQ8WUA7 517 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 L1RE1Q9UN81 338 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 XPAP23025 273 aaPredicted RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 USP10Q14694 798 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 SH3GL1Q99961 368 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 SEMA6BQ9H3T3 888 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 PAIP2BQ9ULR5 123 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 PSMD14O00487 310 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 ABCC3O15438 1527 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 NFX1Q12986 1120 aaKnown RBP7.88□□□□□ -1.15
RIF1-201ENST00000243326 C16orf72Q14CZ0 275 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 ZCWPW2Q504Y3 356 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 C6orf10Q5SRN2 563 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 TRAPPC11Q7Z392 1133 aa7.88□□□□□ -1.15
RIF1-201ENST00000243326 KCNA4P22459 653 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 TFDP1Q14186 410 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PTAR1Q7Z6K3 402 aaPredicted RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 CDC42EP4Q9H3Q1 356 aaKnown RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 VIPAS39Q9H9C1 493 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 IP6K2Q9UHH9 426 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 NFKBIAP25963 317 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 RPL10AP62906 217 aaKnown RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 GALNTL6Q49A17 601 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 MMGT1Q8N4V1 131 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ATP6V0A1Q93050 837 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 BHMTQ93088 406 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 FAM84AQ96KN4 292 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 SEMA4AQ9H3S1 761 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 BARHL2Q9NY43 387 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PDS5AQ29RF7 1337 aaKnown RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 VHLP40337 213 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GPRC5CQ9NQ84 441 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms