RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SCARA3Q6AZY7 606 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 KATNAL2Q8IYT4 538 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 FBXL13Q8NEE6 735 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 GDAP1Q8TB36 358 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 POMGNT1Q8WZA1 660 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 HAUS1Q96CS2 278 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 WDR83Q9BRX9 315 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 TCHPQ9BT92 498 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 ANKFY1Q9P2R3 1169 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 ANAPC7Q9UJX3 599 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 TRAFD1O14545 582 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 ATP9AO75110 1047 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 CDH16O75309 829 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 PROSCO94903 275 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 RALAP11233 206 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 CAP2P40123 477 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 QARSP47897 775 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 NPTX2P47972 431 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 KAZNQ674X7 775 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 CDCA2Q69YH5 1023 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 ACSF2Q96CM8 615 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 LBHD1Q9BQE6 289 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 HAPLN2Q9GZV7 340 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 PHIPQ8WWQ0 1821 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 CETN1Q12798 172 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 RASA2Q15283 850 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 SPDYAQ5MJ70 313 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 DRICH1Q6PGQ1 229 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 ANKRD42Q8N9B4 389 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 DYDC1Q8WWB3 177 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 TLE6Q9H808 572 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 KANSL3Q9P2N6 904 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 SMNDC1O75940 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 TCF4P15884 667 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 MAN1A1P33908 653 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 MAMLD1Q13495 774 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 WDR72Q3MJ13 1102 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 DEFB132Q7Z7B7 95 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 C10orf82Q8WW14 230 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 TMEM237Q96Q45 408 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 KIAA1586Q9HCI6 787 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 PSTPIP1O43586 416 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 VNN1O95497 513 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 EGFRP00533 1210 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 ICAM1P05362 532 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 PAX7P23759 505 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 FASTKD3Q14CZ7 662 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 ZKSCAN8Q15776 578 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 UBR7Q8N806 425 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 DHRS4Q9BTZ2 278 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 TELO2Q9Y4R8 837 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■□□□ 12.4
SEC61A1-201ENST00000243253 RXRBP28702 533 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 MAPK4P31152 587 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 ZC3H12AQ5D1E8 599 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 CPA5Q8WXQ8 436 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 GINS2Q9Y248 185 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 LRRC42Q9Y546 428 aa12.68□□□□□ -0.38
SEC61A1-201ENST00000243253 A6NHS1 94 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 PEX11AO75192 247 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 ATP5DP30049 168 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 STAT4Q14765 748 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 ZNF677Q86XU0 584 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 RIBC1Q8N443 379 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 ENDOVQ8N8Q3 282 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 GRAMD1AQ96CP6 724 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 ANAPC5Q9UJX4 755 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 BPTFQ12830 3046 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 A0A1B0GUA9 196 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 LIASO43766 372 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 MYBL1P10243 752 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 POLGP54098 1239 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 TRAF1Q13077 416 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 OASLQ15646 514 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 SAMD3Q8N6K7 520 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 KLHL29Q96CT2 875 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 KCNK9Q9NPC2 374 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 STYXL1Q9Y6J8 313 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 C3orf70A6NLC5 250 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 TBC1D12O60347 775 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 TNNI1P19237 187 aa12.67□□□□□ -0.38
SEC61A1-201ENST00000243253 MARK3P27448 753 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms