RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.43■■□□□ 1.66
RRP9-201ENST00000232888 GRID2IPA4D2P6 1211 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 EFCAB8A8MWE9 144 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 CD4P01730 458 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 POLR2BP30876 1174 aaKnown RBP25.42■■□□□ 1.66
RRP9-201ENST00000232888 THPOP40225 353 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 MYO1EQ12965 1108 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 TWF2Q6IBS0 349 aaKnown RBP25.42■■□□□ 1.66
RRP9-201ENST00000232888 LRRC52Q8N7C0 313 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 USP38Q8NB14 1042 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 WNT8BQ93098 351 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 THAP2Q9H0W7 228 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 NOD1Q9Y239 953 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 HYOU1Q9Y4L1 999 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 IPPQ9Y573 584 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 TRIM17Q9Y577 477 aa25.42■■□□□ 1.66
RRP9-201ENST00000232888 CYP1A1P04798 512 aaPredicted RBP25.41■■□□□ 1.66
RRP9-201ENST00000232888 UNGP13051 313 aaPredicted RBP25.41■■□□□ 1.66
RRP9-201ENST00000232888 SLFN11Q7Z7L1 901 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 LRRC57Q8N9N7 239 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 SLC43A3Q8NBI5 491 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 SLC35G2Q8TBE7 412 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 PDCL3Q9H2J4 239 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 NXF1Q9UBU9 619 aaKnown RBP25.41■■□□□ 1.66
RRP9-201ENST00000232888 PTCH2Q9Y6C5 1203 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 CITO14578 2027 aa25.41■■□□□ 1.66
RRP9-201ENST00000232888 MTA2O94776 668 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 PAEPP09466 180 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 MYBL1P10243 752 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 CYP3A5P20815 502 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 ABCB4P21439 1286 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 MEI1Q5TIA1 1274 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 GTF3C4Q9UKN8 822 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 HES2Q9Y543 173 aa25.4■■□□□ 1.66
RRP9-201ENST00000232888 CYP1A2P05177 515 aa25.39■■□□□ 1.66
RRP9-201ENST00000232888 ATF7P17544 494 aaPredicted RBP25.39■■□□□ 1.66
RRP9-201ENST00000232888 CKAP4Q07065 602 aaKnown RBP25.39■■□□□ 1.66
RRP9-201ENST00000232888 SMG8Q8ND04 991 aaKnown RBP25.39■■□□□ 1.66
RRP9-201ENST00000232888 ZNF606Q8WXB4 792 aa25.39■■□□□ 1.66
RRP9-201ENST00000232888 ZMAT2Q96NC0 199 aaKnown RBP25.39■■□□□ 1.66
RRP9-201ENST00000232888 TRAIPQ9BWF2 469 aa25.39■■□□□ 1.66
RRP9-201ENST00000232888 TLR10Q9BXR5 811 aa25.39■■□□□ 1.66
RRP9-201ENST00000232888 PARP2Q9UGN5 583 aa25.39■■□□□ 1.66
RRP9-201ENST00000232888 PHF24Q9UPV7 400 aa25.39■■□□□ 1.66
RRP9-201ENST00000232888 A0A0U1RQG5 324 aaPredicted RBP25.39■■□□□ 1.65
RRP9-201ENST00000232888 TLR3O15455 904 aaKnown RBP25.39■■□□□ 1.65
RRP9-201ENST00000232888 THAP12O43422 761 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 LSM8O95777 96 aaKnown RBP25.39■■□□□ 1.65
RRP9-201ENST00000232888 CTSHP09668 335 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 WEE2P0C1S8 567 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 CD58P19256 250 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 TNNC1P63316 161 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 CENPCQ03188 943 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 TRIM71Q2Q1W2 868 aaKnown RBP25.39■■□□□ 1.65
RRP9-201ENST00000232888 FBXO47Q5MNV8 452 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 DNAAF5Q86Y56 855 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 VCPIP1Q96JH7 1222 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 RPGRIP1Q96KN7 1286 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 ZNF518BQ9C0D4 1074 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.39■■□□□ 1.65
RRP9-201ENST00000232888 ERVK-5Q9HDB9 667 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 UVRAGQ9P2Y5 699 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 RNF14Q9UBS8 474 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 POLIQ9UNA4 740 aa25.39■■□□□ 1.65
RRP9-201ENST00000232888 SMIM28A0A1B0GU29 152 aa25.38■■□□□ 1.65
RRP9-201ENST00000232888 TADA3O75528 432 aa25.38■■□□□ 1.65
RRP9-201ENST00000232888 ZSCAN20P17040 1043 aaPredicted RBP25.38■■□□□ 1.65
RRP9-201ENST00000232888 AKAP5P24588 427 aa25.38■■□□□ 1.65
RRP9-201ENST00000232888 A0A1W2PQ45 241 aaPredicted RBP25.37■■□□□ 1.65
RRP9-201ENST00000232888 A0A1W2PQY0 241 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 KBTBD13C9JR72 458 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 MED7O43513 233 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 NSFP46459 744 aaKnown RBP25.37■■□□□ 1.65
RRP9-201ENST00000232888 RAB27AP51159 221 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 NFX1Q12986 1120 aaKnown RBP25.37■■□□□ 1.65
RRP9-201ENST00000232888 SCARA5Q6ZMJ2 495 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 ARHGEF26Q96DR7 871 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 OSBPL9Q96SU4 736 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 APOL6Q9BWW8 343 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 AVENQ9NQS1 362 aaPredicted RBP25.37■■□□□ 1.65
RRP9-201ENST00000232888 STARD7Q9NQZ5 370 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 TRMT13Q9NUP7 481 aaKnown RBP25.37■■□□□ 1.65
RRP9-201ENST00000232888 FAM105AQ9NUU6 356 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 PCDHGC3Q9UN70 934 aa25.37■■□□□ 1.65
RRP9-201ENST00000232888 CES2O00748 559 aa25.36■■□□□ 1.65
RRP9-201ENST00000232888 PNPLA4P41247 253 aa25.36■■□□□ 1.65
RRP9-201ENST00000232888 INCA1Q0VD86 236 aa25.36■■□□□ 1.65
RRP9-201ENST00000232888 UBXN4Q92575 508 aa25.36■■□□□ 1.65
RRP9-201ENST00000232888 CTTNBP2NLQ9P2B4 639 aa25.36■■□□□ 1.65
RRP9-201ENST00000232888 PUF60Q9UHX1 559 aaKnown RBP25.36■■□□□ 1.65
RRP9-201ENST00000232888 KIAA1257Q9ULG3 409 aa25.36■■□□□ 1.65
RRP9-201ENST00000232888 CTAGE15A4D2H0 777 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 CILPO75339 1184 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 CTAGE8P0CG41 777 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 GUCY2FP51841 1108 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 NOMO3P69849 1222 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 PAK2Q13177 524 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 RPS6KA1Q15418 735 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 C9orf57Q5W0N0 161 aa25.35■■□□□ 1.65
RRP9-201ENST00000232888 C11orf63Q6NUN7 778 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms