RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 LRRC8BQ6P9F7 803 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 ADCK1Q86TW2 530 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 SNX31Q8N9S9 440 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 DTX3LQ8TDB6 740 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 KRT35Q92764 455 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 STAMBPL1Q96FJ0 436 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 C20orf96Q9NUD7 363 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 CD274Q9NZQ7 290 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 PKP3Q9Y446 797 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 FLT1P17948 1338 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 AFF2P51816 1311 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 E2F8A0AVK6 867 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 SLC26A4O43511 780 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 RARBP10826 455 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 EMC2Q15006 297 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 C4orf33Q8N1A6 199 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 CLEC4FQ8N1N0 589 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 PABPC5Q96DU9 382 aaKnown RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 MARCOQ9UEW3 520 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 PPP1R37O75864 691 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 CDH2P19022 906 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 CARSP49589 748 aaKnown RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 PTK7Q13308 1070 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 MEI1Q5TIA1 1274 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.1□□□□□ -0.471e-19■■■■■ 159.7
LAMA4-201ENST00000230538 ZNF556Q9HAH1 456 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 RBM12Q9NTZ6 932 aaKnown RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 SLC30A1Q9Y6M5 507 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 PHF20L1A8MW92 1017 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 STXBP3O00186 592 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 GRIN1Q05586 938 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 LBHD1Q9BQE6 289 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-201ENST00000230538 SSU72P8A0A1W2PR75 194 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 IL18RAPO95256 599 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 KRT16P08779 473 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 CTSHP09668 335 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 VCAM1P19320 739 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
LAMA4-201ENST00000230538 CDH16O75309 829 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CD4P01730 458 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CYGBQ8WWM9 190 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 USP15Q9Y4E8 981 aaPredicted RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CEP152O94986 1710 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 FBXW10Q5XX13 1052 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CAPRIN2Q6IMN6 1127 aaKnown RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 KIRREL3Q8IZU9 778 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SLC25A41Q8N5S1 370 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 FAM162AQ96A26 154 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 DDX28Q9NUL7 540 aaKnown RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 GRAP2O75791 330 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 GH1P01241 217 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 TRPC1P48995 793 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 NAB2Q15742 525 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SEPT5Q99719 369 aaPredicted RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 LATS2Q9NRM7 1088 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 FAM47DPA6NHR8 397 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
LAMA4-201ENST00000230538 KDM1AO60341 852 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 NFIXQ14938 502 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 PLD3Q8IV08 490 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 LPAR1Q92633 364 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 PHF21AQ96BD5 680 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 C9orf72Q96LT7 481 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 TEX13BQ9BXU2 312 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 FHOD1Q9Y613 1164 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 MYMKA6NI61 221 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 ZNF263O14978 683 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 TBX3O15119 743 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 RAD51CO43502 376 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 ARHGEF7Q14155 803 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 LRRC36Q1X8D7 754 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SV2CQ496J9 727 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 SLC7A14Q8TBB6 771 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 C17orf80Q9BSJ5 609 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 CATSPERBQ9H7T0 1116 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 PAK5Q9P286 719 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 DAGLAQ9Y4D2 1042 aa12.09□□□□□ -0.47
LAMA4-201ENST00000230538 USP42Q9H9J4 1324 aaKnown RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms