RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SPATA31C2B4DYI2 1134 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 MSH4O15457 936 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 TXNP10599 105 aaKnown RBP21.87■■□□□ 1.09
SNX3-201ENST00000230085 CCNB1P14635 433 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 MAN1A1P33908 653 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 SP2Q02086 613 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 TNFAIP2Q03169 654 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 TTLL4Q14679 1199 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 ZNF720Q7Z2F6 126 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 SLC13A5Q86YT5 568 aaPredicted RBP21.87■■□□□ 1.09
SNX3-201ENST00000230085 CKAP2Q8WWK9 683 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 GPRASP2Q96D09 838 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 FAXDC2Q96IV6 333 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.87■■□□□ 1.09
SNX3-201ENST00000230085 RXFP1Q9HBX9 757 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 AGPAT3Q9NRZ7 376 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 BAIAP2L1Q9UHR4 511 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 CLIC2O15247 247 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 ATP9AO75110 1047 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 FAM13AO94988 1023 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 VIMP08670 466 aaKnown RBP21.87■■□□□ 1.09
SNX3-201ENST00000230085 ABCB4P21439 1286 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 ICAM3P32942 547 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 CLNS1AP54105 237 aaKnown RBP21.87■■□□□ 1.09
SNX3-201ENST00000230085 COPS2P61201 443 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 PPP2R5CQ13362 524 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 CBWD6Q4V339 395 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 CBWD3Q5JTY5 395 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 CBWD5Q5RIA9 395 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 RNF43Q68DV7 783 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 RELL1Q8IUW5 271 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 EPS8L3Q8TE67 593 aaKnown RBP21.87■■□□□ 1.09
SNX3-201ENST00000230085 COPS5Q92905 334 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 BCAS3Q9H6U6 928 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 PAK6Q9NQU5 681 aaPredicted RBP21.87■■□□□ 1.09
SNX3-201ENST00000230085 ABCF3Q9NUQ8 709 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 AGAP1Q9UPQ3 857 aa21.87■■□□□ 1.09
SNX3-201ENST00000230085 UBOX5O94941 541 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 TGFB3P10600 412 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 MAPTP10636 758 aaKnown RBP21.86■■□□□ 1.09
SNX3-201ENST00000230085 KRT13P13646 458 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 KCNA1Q09470 495 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 BFSP1Q12934 665 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 ZNF211Q13398 564 aaPredicted RBP21.86■■□□□ 1.09
SNX3-201ENST00000230085 E2F5Q15329 346 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 TAS2R14Q9NYV8 317 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 PKD2L1Q9P0L9 805 aa21.86■■□□□ 1.09
SNX3-201ENST00000230085 GNEQ9Y223 722 aaKnown RBP21.86■■□□□ 1.09
SNX3-201ENST00000230085 CLGNO14967 610 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 CYP1A2P05177 515 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 ITIH2P19823 946 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 ALCAMQ13740 583 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 DUSP28Q4G0W2 176 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 LHX8Q68G74 356 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 PHLDB3Q6NSJ2 640 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 VSTM1Q6UX27 236 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 NIPA1Q7RTP0 329 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 CFAP61Q8NHU2 1237 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 KRT35Q92764 455 aa21.85■■□□□ 1.09
SNX3-201ENST00000230085 TLDC2A0PJX2 215 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 FSCN2O14926 492 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 TP73O15350 636 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 MAFGO15525 162 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 SORBS3O60504 671 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 GBP2P32456 591 aaPredicted RBP21.84■■□□□ 1.09
SNX3-201ENST00000230085 CMPK2Q5EBM0 449 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 SPDYAQ5MJ70 313 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 PALB2Q86YC2 1186 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 DEFB118Q96PH6 123 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 CTTNBP2NLQ9P2B4 639 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 UVRAGQ9P2Y5 699 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 KIAA0100Q14667 2235 aaKnown RBP21.84■■□□□ 1.09
SNX3-201ENST00000230085 DOCK5Q9H7D0 1870 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 FOXN3O00409 490 aaPredicted RBP21.84■■□□□ 1.09
SNX3-201ENST00000230085 ATP2C2O75185 946 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 FTLP02792 175 aaPredicted RBP21.84■■□□□ 1.09
SNX3-201ENST00000230085 RARBP10826 455 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 UBA1P22314 1058 aaKnown RBP21.84■■□□□ 1.09
SNX3-201ENST00000230085 SNRPFP62306 86 aaKnown RBP21.84■■□□□ 1.09
SNX3-201ENST00000230085 EPC2Q52LR7 807 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 NSMCE1Q8WV22 266 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 MAIP1Q8WWC4 291 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 TCP11Q8WWU5 503 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 STAMBPL1Q96FJ0 436 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 CDHR1Q96JP9 859 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 PLVAPQ9BX97 442 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 AAASQ9NRG9 546 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 ADGRA3Q8IWK6 1321 aa21.84■■□□□ 1.09
SNX3-201ENST00000230085 DNAH12Q6ZR08 3092 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 CCDC189A1A4V9 331 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 DUSP11O75319 330 aaKnown RBP21.83■■□□□ 1.09
SNX3-201ENST00000230085 ANP32DO95626 131 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 ECEL1O95672 775 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 KCNA2P16389 499 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 COMTP21964 271 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 SLC18A1P54219 525 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 CETN1Q12798 172 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 CALCOCO2Q13137 446 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 INTS8Q75QN2 995 aaKnown RBP21.83■■□□□ 1.09
SNX3-201ENST00000230085 TBC1D1Q86TI0 1168 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms