RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 C2CD2Q9Y426 696 aa17.72■□□□□ 0.43
LIM2-201ENST00000221973 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.72■□□□□ 0.43
LIM2-201ENST00000221973 DDHD2O94830 711 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 TMEM191BP0C7N4 346 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 ZNF18P17022 549 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 LAG3P18627 525 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 GUCY2FP51841 1108 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 ENPEPQ07075 957 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 ZBTB6Q15916 424 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 DUSP6Q16828 381 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 DUOXA2Q1HG44 320 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 NT5DC4Q86YG4 428 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 ZNF280BQ86YH2 543 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 LRRC43Q8N309 656 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 BEST2Q8NFU1 509 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 CACTINQ8WUQ7 758 aaKnown RBP17.71■□□□□ 0.43
LIM2-201ENST00000221973 SLC35C1Q96A29 364 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 ANKRD36BP1Q96IX9 119 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 FAM193BQ96PV7 902 aaPredicted RBP17.71■□□□□ 0.43
LIM2-201ENST00000221973 TSPAN18Q96SJ8 248 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 MTMR12Q9C0I1 747 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 GOLGA2P5Q9HBQ8 144 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 SLC38A7Q9NVC3 462 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 TAB2Q9NYJ8 693 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 CACNG4Q9UBN1 327 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 UBQLN1Q9UMX0 589 aaKnown RBP17.71■□□□□ 0.43
LIM2-201ENST00000221973 LZTS1Q9Y250 596 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 USP15Q9Y4E8 981 aaPredicted RBP17.71■□□□□ 0.43
LIM2-201ENST00000221973 ZNF318Q5VUA4 2279 aa17.71■□□□□ 0.43
LIM2-201ENST00000221973 PIEZO1Q92508 2521 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 CASTOR2A6NHX0 329 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 LOC730098B7Z3J9 87 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 XPOTO43592 962 aaKnown RBP17.7■□□□□ 0.42
LIM2-201ENST00000221973 TNNC2P02585 160 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 PRKCSHP14314 528 aaPredicted RBP17.7■□□□□ 0.42
LIM2-201ENST00000221973 GCLMP48507 274 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 CLDN10P78369 228 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
LIM2-201ENST00000221973 PPP3CAQ08209 521 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 CBX2Q14781 532 aaPredicted RBP17.7■□□□□ 0.42
LIM2-201ENST00000221973 KRT31Q15323 416 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 NAB2Q15742 525 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 KCNT2Q6UVM3 1135 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 ANKRD20A12PQ8NF67 263 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 MICAL1Q8TDZ2 1067 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 RSPH1Q8WYR4 309 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 SUSD6Q92537 303 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 NRDE2Q9H7Z3 1164 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 DPP3Q9NY33 737 aa17.7■□□□□ 0.42
LIM2-201ENST00000221973 HIDE1A8MVS5 230 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 STX10O60499 249 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 B4GALT3O60512 393 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 MCCD1P59942 119 aaPredicted RBP17.69■□□□□ 0.42
LIM2-201ENST00000221973 KCNH2Q12809 1159 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 TUSC3Q13454 348 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 BIRC3Q13489 604 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 MAN2A1Q16706 1144 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 PDE12Q6L8Q7 609 aaKnown RBP17.69■□□□□ 0.42
LIM2-201ENST00000221973 TMEM184AQ6ZMB5 413 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 HFE2Q6ZVN8 426 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 RABGGTAQ92696 567 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 CDCA3Q99618 268 aaPredicted RBP17.69■□□□□ 0.42
LIM2-201ENST00000221973 S1PR5Q9H228 398 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 VPS16Q9H269 839 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
LIM2-201ENST00000221973 LIMA1Q9UHB6 759 aaKnown RBP17.69■□□□□ 0.42
LIM2-201ENST00000221973 PES1O00541 588 aaKnown RBP17.68■□□□□ 0.42
LIM2-201ENST00000221973 ZC3H11AO75152 810 aaKnown RBP eCLIP17.68■□□□□ 0.42
LIM2-201ENST00000221973 PHACTR2O75167 634 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 AFPP02771 609 aaKnown RBP17.68■□□□□ 0.42
LIM2-201ENST00000221973 C4BPAP04003 597 aaKnown RBP17.68■□□□□ 0.42
LIM2-201ENST00000221973 ITGB3P05106 788 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 KRT19P08727 400 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 CYP3A5P20815 502 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 GTF2H1P32780 548 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 AP3M2P53677 418 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 DSC1Q08554 894 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 VWA3BQ502W6 1294 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 TDRD10Q5VZ19 366 aaKnown RBP17.68■□□□□ 0.42
LIM2-201ENST00000221973 PLPP4Q5VZY2 271 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 SCARA3Q6AZY7 606 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 SV2AQ7L0J3 742 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 TRAPPC11Q7Z392 1133 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 C1orf127Q8N9H9 656 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 ZNF558Q96NG5 402 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 PAAF1Q9BRP4 392 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 TMEM8AQ9HCN3 771 aa17.68■□□□□ 0.42
LIM2-201ENST00000221973 TPM2P07951 284 aa17.67■□□□□ 0.42
LIM2-201ENST00000221973 POLR2BP30876 1174 aaKnown RBP17.67■□□□□ 0.42
LIM2-201ENST00000221973 OR1G1P47890 313 aa17.67■□□□□ 0.42
LIM2-201ENST00000221973 FMO5P49326 533 aa17.67■□□□□ 0.42
LIM2-201ENST00000221973 MXI1P50539 228 aa17.67■□□□□ 0.42
LIM2-201ENST00000221973 CLCNKBP51801 687 aa17.67■□□□□ 0.42
LIM2-201ENST00000221973 COPB1P53618 953 aaKnown RBP17.67■□□□□ 0.42
LIM2-201ENST00000221973 MYL7Q01449 175 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms