RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 YTHDF3Q7Z739 585 aaKnown RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 FHDC1Q9C0D6 1143 aaPredicted RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 R3HDMLQ9H3Y0 253 aa15.54■□□□□ 0.08
CNOT3-201ENST00000221232 SAE1Q9UBE0 346 aaPredicted RBP15.54■□□□□ 0.08
CNOT3-201ENST00000221232 F8VP50 259 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 DKC1O60832 514 aaKnown RBP eCLIP15.53■□□□□ 0.08
CNOT3-201ENST00000221232 OATP04181 439 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 GJB1P08034 283 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 IZUMO3Q5VZ72 239 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 SRRM1Q8IYB3 904 aaKnown RBP15.53■□□□□ 0.08
CNOT3-201ENST00000221232 LRRC71Q8N4P6 559 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 AS3MTQ9HBK9 375 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 FGFR1OP2Q9NVK5 253 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 WHRNQ9P202 907 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 ZNF148Q9UQR1 794 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.53■□□□□ 0.08
CNOT3-201ENST00000221232 FDX1P10109 184 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 GBP1P32455 592 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 BPIFB4P59827 614 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 CENPCQ03188 943 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 MPP2Q14168 576 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 STXBP2Q15833 593 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 TRIM50Q86XT4 487 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 RHOT1Q8IXI2 618 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 C12orf50Q8NA57 414 aaPredicted RBP15.53■□□□□ 0.08
CNOT3-201ENST00000221232 ZNF606Q8WXB4 792 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 RUNDC3BQ96NL0 473 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 MTMR12Q9C0I1 747 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 NINJ2Q9NZG7 142 aa15.53■□□□□ 0.08
CNOT3-201ENST00000221232 C5orf60A6NFR6 353 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 GOLGA8MH3BSY2 632 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 TTC4O95801 387 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.08
CNOT3-201ENST00000221232 MYL6P60660 151 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 DYNLT1P63172 113 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 P3H1Q32P28 736 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 DCAF15Q66K64 600 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 TRMT10CQ7L0Y3 403 aaKnown RBP15.52■□□□□ 0.08
CNOT3-201ENST00000221232 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.52■□□□□ 0.08
CNOT3-201ENST00000221232 MCEEQ96PE7 176 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 PORCNQ9H237 461 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 KLC4Q9NSK0 619 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 SAMD15Q9P1V8 674 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 DNPEPQ9ULA0 475 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 IVNS1ABPQ9Y6Y0 642 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 DOCK5Q9H7D0 1870 aa15.52■□□□□ 0.08
CNOT3-201ENST00000221232 IFNB1P01574 187 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 CLTAP09496 248 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 TFAMQ00059 246 aaKnown RBP15.52■□□□□ 0.07
CNOT3-201ENST00000221232 LY6KQ17RY6 165 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 DCUN1D2Q6PH85 259 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 RHBDF2Q6PJF5 856 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 TAOK1Q7L7X3 1001 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 PRPF31Q8WWY3 499 aaKnown RBP15.52■□□□□ 0.07
CNOT3-201ENST00000221232 CCT6BQ92526 530 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 PPP1R16BQ96T49 567 aa15.52■□□□□ 0.07
CNOT3-201ENST00000221232 AVENQ9NQS1 362 aaPredicted RBP15.52■□□□□ 0.07
CNOT3-201ENST00000221232 SPDYE16A6NNV3 312 aaPredicted RBP15.51■□□□□ 0.07
CNOT3-201ENST00000221232 CSDE1O75534 798 aaKnown RBP15.51■□□□□ 0.07
CNOT3-201ENST00000221232 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 BRAFP15056 766 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 SLC1A1P43005 524 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 NUGGCQ68CJ6 796 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 XRRA1Q6P2D8 792 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 MFSD7Q6UXD7 560 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 THNSL1Q8IYQ7 743 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 TRPM4Q8TD43 1214 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 NXF1Q9UBU9 619 aaKnown RBP15.51■□□□□ 0.07
CNOT3-201ENST00000221232 CCT8L1PA6NM43 557 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
CNOT3-201ENST00000221232 POC1B-GALNT4F8VUJ3 575 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
CNOT3-201ENST00000221232 SPAG7O75391 227 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 PTK6Q13882 451 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 CAPSQ13938 189 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM132AQ24JP5 1023 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 SMTNL2Q2TAL5 461 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 NCAPG2Q86XI2 1143 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 ANKS4BQ8N8V4 417 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 FEZF2Q8TBJ5 459 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 CENPTQ96BT3 561 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 CDHR1Q96JP9 859 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 TRAIPQ9BWF2 469 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 KIAA1586Q9HCI6 787 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 ABCF3Q9NUQ8 709 aa15.51■□□□□ 0.07
CNOT3-201ENST00000221232 A0A0B4J269 797 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 BANF1O75531 89 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 KRT1P04264 644 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 HIRAP54198 1017 aaPredicted RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 NFX1Q12986 1120 aaKnown RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 TREML2Q5T2D2 321 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 DPH6Q7L8W6 267 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 TRAPPC12Q8WVT3 735 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 DHX33Q9H6R0 707 aaKnown RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 MRPL47Q9HD33 250 aaKnown RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 TJP2Q9UDY2 1190 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 NAALADL1Q9UQQ1 740 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 MYBL1P10243 752 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms