RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 HIST1H2AHQ96KK5 128 aa18.72■□□□□ 0.59
EXTL3-201ENST00000220562 HIST1H2AJQ99878 128 aa18.72■□□□□ 0.59
EXTL3-201ENST00000220562 LBHD1Q9BQE6 289 aaPredicted RBP18.72■□□□□ 0.59
EXTL3-201ENST00000220562 H2AFJQ9BTM1 129 aa18.72■□□□□ 0.59
EXTL3-201ENST00000220562 MRPL1Q9BYD6 325 aaKnown RBP18.72■□□□□ 0.59
EXTL3-201ENST00000220562 FAM49BQ9NUQ9 324 aa18.72■□□□□ 0.59
EXTL3-201ENST00000220562 hCG_2014768A0A024R1R8 64 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 AKAP10O43572 662 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 SRP72O76094 671 aaKnown RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 GH1P01241 217 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 PDHBP11177 359 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 ATXN3P54252 364 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 LRRC36Q1X8D7 754 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 SMTNL2Q2TAL5 461 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 CCNI2Q6ZMN8 369 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 METTL5Q9NRN9 209 aaKnown RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 NDUFS3O75489 264 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 IL18RAPO95256 599 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 HLA-DRAP01903 254 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 SLC7A14Q8TBB6 771 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 SEPT5Q99719 369 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 USP15Q9Y4E8 981 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 CDC42EP1Q00587 391 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 ATF7IP2Q5U623 682 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 ARHGAP18Q8N392 663 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 ZNF280CQ8ND82 737 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 LPAR1Q92633 364 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 TEX13BQ9BXU2 312 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 VIPAS39Q9H9C1 493 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 ZNF70Q9UC06 446 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 AKT1P31749 480 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 BLVRAP53004 296 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 RABGAP1LQ5R372 815 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 C16orf89Q6UX73 402 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 CD274Q9NZQ7 290 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 PCDHB8Q9UN66 801 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 PPP3CCP48454 512 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 SERPINB4P48594 390 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 JAMLQ86YT9 394 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 MOV10L1Q9BXT6 1211 aaKnown RBP18.71■□□□□ 0.59
EXTL3-201ENST00000220562 EHD2Q9NZN4 543 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 NYAP2Q9P242 653 aa18.71■□□□□ 0.59
EXTL3-201ENST00000220562 A0A1W2PQJ5 194 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 EIF3DO15371 548 aaKnown RBP eCLIP18.7■□□□□ 0.58
EXTL3-201ENST00000220562 ARHGEF9O43307 516 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 RFC5P40937 340 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 RAD9BQ6WBX8 426 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 SNX31Q8N9S9 440 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 RAET1EQ8TD07 263 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 CCT8L2Q96SF2 557 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 PI4K2AQ9BTU6 479 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 KATNAL1Q9BW62 490 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 KCNH4Q9UQ05 1017 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 FAM47DPA6NHR8 397 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 C5orf58C9J3I9 102 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 EIF3HO15372 352 aaKnown RBP eCLIP18.7■□□□□ 0.581e-6■■■■□ 22.3
EXTL3-201ENST00000220562 ARIH2O95376 493 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 SOX11P35716 441 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 AGBL2Q5U5Z8 902 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 SEPT1Q8WYJ6 367 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 TMEM8AQ9HCN3 771 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 MYO1GB0I1T2 1018 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 ITGA8P53708 1063 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 CYP4A22Q5TCH4 519 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 GJB7Q6PEY0 223 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 CELF4Q9BZC1 486 aaKnown RBP18.7■□□□□ 0.58
EXTL3-201ENST00000220562 EPB41L4AQ9HCS5 686 aaPredicted RBP18.7■□□□□ 0.58
EXTL3-201ENST00000220562 PKD2L2Q9NZM6 624 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 ADGRA2Q96PE1 1338 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 RASSF10A6NK89 507 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 EXTL3O43909 919 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 GPD1P21695 349 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 GTF2H1P32780 548 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 TC2NQ8N9U0 490 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
EXTL3-201ENST00000220562 LSM7Q9UK45 103 aaKnown RBP18.7■□□□□ 0.58
EXTL3-201ENST00000220562 EN1Q05925 392 aaPredicted RBP18.7■□□□□ 0.58
EXTL3-201ENST00000220562 ABHD8Q96I13 439 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 MXRA8Q9BRK3 442 aa18.7■□□□□ 0.58
EXTL3-201ENST00000220562 CD4P01730 458 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 ANTXR2P58335 489 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 DNAL1Q4LDG9 190 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.69■□□□□ 0.58
EXTL3-201ENST00000220562 SEPT8Q92599 483 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 IL17RAQ96F46 866 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 A0A0G2JLW4 131 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 SNX17Q15036 470 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 SV2CQ496J9 727 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 C3orf62Q6ZUJ4 267 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 SEC16BQ96JE7 1060 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 CDH16O75309 829 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 MAGEA4P43358 317 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 AARS2Q5JTZ9 985 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms