RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 AFPP02771 609 aaKnown RBP28.68■■■□□ 2.18
STUB1-201ENST00000219548 ZNF18P17022 549 aa28.68■■■□□ 2.18
STUB1-201ENST00000219548 FAM171A1Q5VUB5 890 aa28.68■■■□□ 2.18
STUB1-201ENST00000219548 RNF168Q8IYW5 571 aaPredicted RBP28.68■■■□□ 2.18
STUB1-201ENST00000219548 VPS52Q8N1B4 723 aa28.68■■■□□ 2.18
STUB1-201ENST00000219548 TUBGCP2Q9BSJ2 902 aa28.68■■■□□ 2.18
STUB1-201ENST00000219548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.68■■■□□ 2.181e-6■■■■■ 38.5
STUB1-201ENST00000219548 PUF60Q9UHX1 559 aaKnown RBP28.68■■■□□ 2.18
STUB1-201ENST00000219548 PRRC2BQ5JSZ5 2229 aaKnown RBP28.67■■■□□ 2.18
STUB1-201ENST00000219548 LRRN2O75325 713 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 CLSTN1O94985 981 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 PRKCSHP14314 528 aaPredicted RBP28.67■■■□□ 2.18
STUB1-201ENST00000219548 PNPLA4P41247 253 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 AARSP49588 968 aaKnown RBP eCLIP28.67■■■□□ 2.18
STUB1-201ENST00000219548 MYL7Q01449 175 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 CAMK1Q14012 370 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 MAN2A1Q16706 1144 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 SV2CQ496J9 727 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 TAB2Q9NYJ8 693 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 LZTS1Q9Y250 596 aa28.67■■■□□ 2.18
STUB1-201ENST00000219548 SOD2P04179 222 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 ATP1A3P13637 1013 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 ERVFC1P60507 584 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 UBE3AQ05086 875 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 KRT31Q15323 416 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 GPR153Q6NV75 609 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 DSTYKQ6XUX3 929 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 SEMA4DQ92854 862 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 SUSD3Q96L08 255 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 PI4K2AQ9BTU6 479 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 HERC2P3Q9BVR0 1158 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 XYLT2Q9H1B5 865 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 REV3LO60673 3130 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 KPNA7A9QM74 516 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 TRAPPC3O43617 180 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 TKTP29401 623 aaKnown RBP28.66■■■□□ 2.18
STUB1-201ENST00000219548 ELAVL2Q12926 359 aaKnown RBP28.66■■■□□ 2.18
STUB1-201ENST00000219548 MYO1EQ12965 1108 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 MIIPQ5JXC2 388 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 CEP57Q86XR8 500 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 FBXL13Q8NEE6 735 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 AUTS2Q8WXX7 1259 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 SENP8Q96LD8 212 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 ZBP1Q9H171 429 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 TLR9Q9NR96 1032 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 PCDHGC5Q9Y5F6 944 aa28.66■■■□□ 2.18
STUB1-201ENST00000219548 CDK11BP21127 795 aaKnown RBP28.65■■■□□ 2.18
STUB1-201ENST00000219548 IRS1P35568 1242 aa28.65■■■□□ 2.18
STUB1-201ENST00000219548 ZNF699Q32M78 642 aa28.65■■■□□ 2.18
STUB1-201ENST00000219548 RTP2Q5QGT7 225 aa28.65■■■□□ 2.18
STUB1-201ENST00000219548 SPOPLQ6IQ16 392 aa28.65■■■□□ 2.18
STUB1-201ENST00000219548 RNF214Q8ND24 703 aa28.65■■■□□ 2.18
STUB1-201ENST00000219548 TCF25Q9BQ70 676 aa28.65■■■□□ 2.18
STUB1-201ENST00000219548 TIMM13Q9Y5L4 95 aaPredicted RBP28.65■■■□□ 2.18
STUB1-201ENST00000219548 M0QZQ0 153 aa28.64■■■□□ 2.17
STUB1-201ENST00000219548 N4BP1O75113 896 aaKnown RBP28.64■■■□□ 2.17
STUB1-201ENST00000219548 USP41Q3LFD5 358 aa28.64■■■□□ 2.17
STUB1-201ENST00000219548 ENTPD7Q9NQZ7 604 aa28.64■■■□□ 2.17
STUB1-201ENST00000219548 RAB20Q9NX57 234 aa28.64■■■□□ 2.17
STUB1-201ENST00000219548 SNX9Q9Y5X1 595 aa28.64■■■□□ 2.17
STUB1-201ENST00000219548 PES1O00541 588 aaKnown RBP28.63■■■□□ 2.17
STUB1-201ENST00000219548 C2CD2LO14523 706 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 FGFR3P22607 806 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 ATICP31939 592 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 VWA3BQ502W6 1294 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 PLPP4Q5VZY2 271 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.63■■■□□ 2.17
STUB1-201ENST00000219548 TMC7Q7Z402 723 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 DEFB123Q8N688 67 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 VPS16Q9H269 839 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 NDST4Q9H3R1 872 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 CHST7Q9NS84 486 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 LIMA1Q9UHB6 759 aaKnown RBP28.63■■■□□ 2.17
STUB1-201ENST00000219548 PCDHB8Q9UN66 801 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 COQ4Q9Y3A0 265 aa28.63■■■□□ 2.17
STUB1-201ENST00000219548 GOLGA6L19H0YKK7 550 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 CYB561D2O14569 222 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 ASS1P00966 412 aaKnown RBP28.62■■■□□ 2.17
STUB1-201ENST00000219548 CA8P35219 290 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 GLUD2P49448 558 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 SGSM1Q2NKQ1 1148 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 WDR72Q3MJ13 1102 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 KIAA1841Q6NSI8 718 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 ANKRD20A12PQ8NF67 263 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 TTPALQ9BTX7 342 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 LMAN2LQ9H0V9 348 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 NXF1Q9UBU9 619 aaKnown RBP28.62■■■□□ 2.17
STUB1-201ENST00000219548 POLIQ9UNA4 740 aa28.62■■■□□ 2.17
STUB1-201ENST00000219548 EYSQ5T1H1 3165 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 STAU1O95793 577 aaKnown RBP28.61■■■□□ 2.17
STUB1-201ENST00000219548 URODP06132 367 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 CTSAP10619 480 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 PAX3P23760 479 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 ADGRE1Q14246 886 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 MICAL1Q8TDZ2 1067 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 RIN2Q8WYP3 895 aaPredicted RBP28.61■■■□□ 2.17
STUB1-201ENST00000219548 IMPG2Q9BZV3 1241 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 VRTNQ9H8Y1 702 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 GDAP2Q9NXN4 497 aa28.61■■■□□ 2.17
STUB1-201ENST00000219548 STK39Q9UEW8 545 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms