RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 CYP2C9P11712 490 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 ITGA4P13612 1032 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 CTGFP29279 349 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 CPT1AP50416 773 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 PEX5P50542 639 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 SMYD5Q6GMV2 418 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 RUFY4Q6ZNE9 571 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 PHF13Q86YI8 300 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 AENQ8WTP8 325 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 CDHR5Q9HBB8 845 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 Q9Y3F1 56 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 MROH7Q68CQ1 1323 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 RAD51CO43502 376 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 HEXIM1O94992 359 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 MYL3P08590 195 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 ADAM17P78536 824 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 CDC42EP1Q00587 391 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 BEX3Q00994 111 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 SREBF2Q12772 1141 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 ZNF211Q13398 564 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 C2CD6Q53TS8 623 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 GCOM2Q9BZD3 368 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 AP5M1Q9H0R1 490 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 GDF3Q9NR23 364 aa18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 NXF1Q9UBU9 619 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-201ENST00000216840 ITGB3P05106 788 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 CTNNA2P26232 953 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 HOXA11P31270 313 aaPredicted RBP18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 PTP4A2Q12974 167 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 LLGL2Q6P1M3 1020 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 PHLDB2Q86SQ0 1253 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 VCPIP1Q96JH7 1222 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 ACAP3Q96P50 834 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 BCO2Q9BYV7 579 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 ANAPC7Q9UJX3 599 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 RALGAPA2Q2PPJ7 1873 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 SPOPO43791 374 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 BRD2P25440 801 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 CTNNA1P35221 906 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 GRM5P41594 1212 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 YWHAEP62258 255 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 TMEM132DQ14C87 1099 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 LIN9Q5TKA1 542 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 PPP1R2P3Q6NXS1 205 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 IFT20Q8IY31 132 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 PLEKHA4Q9H4M7 779 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 ADAM22Q9P0K1 906 aa18.37■□□□□ 0.53
RABGGTA-201ENST00000216840 ZSCAN5CA6NGD5 496 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 GUCY2DQ02846 1103 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 WDR72Q3MJ13 1102 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 DCAF4L1Q3SXM0 396 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 MMS22LQ6ZRQ5 1243 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 FAXDC2Q96IV6 333 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 ZIC5Q96T25 663 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 OSMRQ99650 979 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 TRIM7Q9C029 511 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 DDX47Q9H0S4 455 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 EPB41L5Q9HCM4 733 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 PCDHA3Q9Y5H8 950 aa18.36■□□□□ 0.53
RABGGTA-201ENST00000216840 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 SART1O43290 800 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 NPTXRO95502 500 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 TNNT3P45378 269 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 RAP1GAPP47736 663 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 TM4SF4P48230 202 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 C1QBPQ07021 282 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 SMC1AQ14683 1233 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 AADACL2Q6P093 401 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 TFAP2BQ92481 460 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 SDCBP2Q9H190 292 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 VRTNQ9H8Y1 702 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 ST7Q9NRC1 585 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 C2CD2Q9Y426 696 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 NR2E1Q9Y466 385 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 LSM8O95777 96 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 DARSP14868 501 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 ATICP31939 592 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 CLUL1Q15846 466 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 PLEKHA7Q6IQ23 1121 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 TRPV1Q8NER1 839 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 GDAP1L1Q96MZ0 367 aa18.35■□□□□ 0.53
RABGGTA-201ENST00000216840 ESYT3A0FGR9 886 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 TREHO43280 583 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 POLR2BP30876 1174 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 MAMLD1Q13495 774 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 FSCN1Q16658 493 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 NT5DC4Q86YG4 428 aa18.34■□□□□ 0.53
RABGGTA-201ENST00000216840 CD302Q8IX05 232 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms