RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 DNAH12Q6ZR08 3092 aa17.8■□□□□ 0.44
POLR2E-201ENST00000215587 PDCD11Q14690 1871 aaKnown RBP17.8■□□□□ 0.44
POLR2E-201ENST00000215587 F8VZ95 297 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 ACRP10323 421 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
POLR2E-201ENST00000215587 KCNJ6P48051 423 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 AFF1P51825 1210 aaKnown RBP17.79■□□□□ 0.44
POLR2E-201ENST00000215587 JAM2P57087 298 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 TNNC1P63316 161 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 RNASELQ05823 741 aaKnown RBP17.79■□□□□ 0.44
POLR2E-201ENST00000215587 TUSC3Q13454 348 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 ASIC2Q16515 512 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 SV2CQ496J9 727 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 TMEM130Q8N3G9 435 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 JAKMIP2Q96AA8 810 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
POLR2E-201ENST00000215587 KREMEN1Q96MU8 473 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 UROC1Q96N76 676 aa17.79■□□□□ 0.44
POLR2E-201ENST00000215587 MRPL9Q9BYD2 267 aaKnown RBP17.79■□□□□ 0.44
POLR2E-201ENST00000215587 NXF1Q9UBU9 619 aaKnown RBP17.79■□□□□ 0.44
POLR2E-201ENST00000215587 PIRO00625 290 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 CCDC172P0C7W6 258 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 FERP16591 822 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 SOX5P35711 763 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 TAF6P49848 677 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 NAB2Q15742 525 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 WDR72Q3MJ13 1102 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 HS1BP3Q53T59 392 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 SCARA3Q6AZY7 606 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 PSRC1Q6PGN9 363 aaPredicted RBP17.78■□□□□ 0.44
POLR2E-201ENST00000215587 SCARA5Q6ZMJ2 495 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.78■□□□□ 0.44
POLR2E-201ENST00000215587 KAT5Q92993 513 aa17.78■□□□□ 0.44
POLR2E-201ENST00000215587 FAM193BQ96PV7 902 aaPredicted RBP17.78■□□□□ 0.44
POLR2E-201ENST00000215587 BAG1Q99933 345 aaPredicted RBP17.78■□□□□ 0.44
POLR2E-201ENST00000215587 LBHD1Q9BQE6 289 aaPredicted RBP17.78■□□□□ 0.44
POLR2E-201ENST00000215587 TET1Q8NFU7 2136 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 CASTOR2A6NHX0 329 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 PODXLO00592 558 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 PPEF2O14830 753 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 UPP2O95045 317 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 FGBP02675 491 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 SYN1P17600 705 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 HNRNPH3P31942 346 aaKnown RBP17.77■□□□□ 0.44
POLR2E-201ENST00000215587 USP8P40818 1118 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 WDR5P61964 334 aaKnown RBP17.77■□□□□ 0.44
POLR2E-201ENST00000215587 SMYD5Q6GMV2 418 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 CYP26C1Q6V0L0 522 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 SHC3Q92529 594 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 CASD1Q96PB1 797 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 CYP3A43Q9HB55 503 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 TBC1D13Q9NVG8 400 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 AIPL1Q9NZN9 384 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 ZMYND8Q9ULU4 1186 aaPredicted RBP17.77■□□□□ 0.44
POLR2E-201ENST00000215587 POLIQ9UNA4 740 aa17.77■□□□□ 0.44
POLR2E-201ENST00000215587 MICAL3Q7RTP6 2002 aa17.77■□□□□ 0.43
POLR2E-201ENST00000215587 SPTBN5Q9NRC6 3674 aaKnown RBP17.76■□□□□ 0.43
POLR2E-201ENST00000215587 TBKBP1A7MCY6 615 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 ZBBXA8MT70 800 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 GFPT2O94808 682 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 SERPING1P05155 500 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 KRT5P13647 590 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 FECHP22830 423 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 PAX3P23760 479 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 ASPAP45381 313 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 ARID5AQ03989 594 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 MEA1Q16626 185 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 TDRD12Q587J7 1177 aaKnown RBP17.76■□□□□ 0.43
POLR2E-201ENST00000215587 TMTC1Q8IUR5 882 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 CRIPAKQ8N1N5 446 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 MMS19Q96T76 1030 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 ARID3AQ99856 593 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 BCO2Q9BYV7 579 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 LTBP2Q14767 1821 aa17.76■□□□□ 0.43
POLR2E-201ENST00000215587 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 KPNA7A9QM74 516 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 FOXN3O00409 490 aaPredicted RBP17.75■□□□□ 0.43
POLR2E-201ENST00000215587 PNMA6AP0CW24 399 aaPredicted RBP17.75■□□□□ 0.43
POLR2E-201ENST00000215587 SKILP12757 684 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 GATMP50440 423 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 CLCNKBP51801 687 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 CDK17Q00537 523 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 DSC1Q08554 894 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 KLHL30Q0D2K2 578 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 E4F1Q66K89 784 aaPredicted RBP17.75■□□□□ 0.43
POLR2E-201ENST00000215587 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 OTOP2Q7RTS6 562 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 FAM71AQ8IYT1 594 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 TDHQ8IZJ6 230 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 LRRC43Q8N309 656 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 TTC39CQ8N584 583 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 TOP1MTQ969P6 601 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 ZNF830Q96NB3 372 aaPredicted RBP17.75■□□□□ 0.43
POLR2E-201ENST00000215587 GPR88Q9GZN0 384 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 KCNF1Q9H3M0 494 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 FAM124BQ9H5Z6 455 aaPredicted RBP17.75■□□□□ 0.43
POLR2E-201ENST00000215587 GDAP2Q9NXN4 497 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 PCDHB4Q9Y5E5 795 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 SNX9Q9Y5X1 595 aa17.75■□□□□ 0.43
POLR2E-201ENST00000215587 BZW2Q9Y6E2 419 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms