RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 BHMG1C9JSJ3 638 aaPredicted RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TP73O15350 636 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 LUC7L3O95232 432 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 KRT1P04264 644 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TFDP1Q14186 410 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TMEM63BQ5T3F8 832 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 DCUN1D2Q6PH85 259 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 ZC3H3Q8IXZ2 948 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 CERKQ8TCT0 537 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TEKT3Q9BXF9 490 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 MAK16Q9BXY0 300 aaKnown RBP17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TRIM4Q9C037 500 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 IRAK4Q9NWZ3 460 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 CYP39A1Q9NYL5 469 aa17.72■□□□□ 0.43
CTDP1-201ENST00000075430 TXNDC9O14530 226 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 ATP9AO75110 1047 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 ENO1P06733 434 aaKnown RBP17.71■□□□□ 0.43
CTDP1-201ENST00000075430 GCLCP48506 637 aaPredicted RBP17.71■□□□□ 0.43
CTDP1-201ENST00000075430 TMEM179Q6ZVK1 233 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 CCDC33Q8N5R6 958 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 EFCAB3Q8N7B9 438 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 ACCSQ96QU6 501 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 ARL8BQ9NVJ2 186 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 NMRK1Q9NWW6 199 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 GTF3C4Q9UKN8 822 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 WASF2Q9Y6W5 498 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 MAPK6Q16659 721 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 MFSD5Q6N075 450 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 RHPN2Q8IUC4 686 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 CCDC89Q8N998 374 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 SCG3Q8WXD2 468 aaKnown RBP17.71■□□□□ 0.43
CTDP1-201ENST00000075430 SYT11Q9BT88 431 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 ZNF395Q9H8N7 513 aaPredicted RBP17.71■□□□□ 0.43
CTDP1-201ENST00000075430 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
CTDP1-201ENST00000075430 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.71■□□□□ 0.43
CTDP1-201ENST00000075430 DENND3A2RUS2 1198 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 PIK3R2O00459 728 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 OAS1P00973 400 aaKnown RBP17.71■□□□□ 0.42
CTDP1-201ENST00000075430 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.42
CTDP1-201ENST00000075430 ESRRAP11474 423 aaPredicted RBP17.71■□□□□ 0.42
CTDP1-201ENST00000075430 RPL7AP62424 266 aaKnown RBP17.71■□□□□ 0.42
CTDP1-201ENST00000075430 BASP1P80723 227 aaKnown RBP17.71■□□□□ 0.42
CTDP1-201ENST00000075430 DGKZQ13574 1117 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 CFAP157Q5JU67 520 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 SH3GL3Q99963 347 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 SLC13A1Q9BZW2 595 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 SMYD3Q9H7B4 428 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 WHRNQ9P202 907 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 PCDHB4Q9Y5E5 795 aa17.71■□□□□ 0.42
CTDP1-201ENST00000075430 CYP3A7-CYP3A51PA0A087WV96 503 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 E2F8A0AVK6 867 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 USP1O94782 785 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 ALAS1P13196 640 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 KCNA3P22001 575 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 HOXA10P31260 410 aaPredicted RBP17.7■□□□□ 0.42
CTDP1-201ENST00000075430 STAT2P52630 851 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 GRIK3Q13003 919 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 ALCAMQ13740 583 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 PODNQ7Z5L7 613 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 PALM2Q8IXS6 379 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 CCDC124Q96CT7 223 aaKnown RBP17.7■□□□□ 0.42
CTDP1-201ENST00000075430 AGBL1Q96MI9 1066 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 FIZ1Q96SL8 496 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.7■□□□□ 0.429e-7■■■■□ 25.7
CTDP1-201ENST00000075430 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
CTDP1-201ENST00000075430 PAPOLAP51003 745 aaKnown RBP17.7■□□□□ 0.42
CTDP1-201ENST00000075430 PLEKHG4Q58EX7 1191 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 ASRGL1Q7L266 308 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 GRK7Q8WTQ7 553 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 ZNF75CPQ92670 426 aaPredicted RBP17.7■□□□□ 0.42
CTDP1-201ENST00000075430 POLR3CQ9BUI4 534 aaPredicted RBP17.7■□□□□ 0.42
CTDP1-201ENST00000075430 ANKFY1Q9P2R3 1169 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 PCSK1NQ9UHG2 260 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 NUMBLQ9Y6R0 609 aa17.7■□□□□ 0.42
CTDP1-201ENST00000075430 HAUS5O94927 633 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 TROVE2P10155 538 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTDP1-201ENST00000075430 MARK3P27448 753 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 DLGAP5Q15398 846 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 BMT2Q1RMZ1 405 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 SV2AQ7L0J3 742 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 SIAH1Q8IUQ4 282 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 IL31RAQ8NI17 732 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 PYROXD1Q8WU10 500 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 CFAP57Q96MR6 1250 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 RILPQ96NA2 401 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 FAM111AQ96PZ2 611 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 FNBP1Q96RU3 617 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
CTDP1-201ENST00000075430 IKBKGQ9Y6K9 419 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 CCDC160A6NGH7 325 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 H3BRJ5 948 aa17.69■□□□□ 0.42
CTDP1-201ENST00000075430 EIF3DO15371 548 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTDP1-201ENST00000075430 T-ENOLP0DO92 83 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms