RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LGALS2P05162 132 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 CYP2C8P10632 490 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 PROZP22891 400 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 PTGIRP43119 386 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 SSR1P43307 286 aaKnown RBP8.79□□□□□ -1
VAMP3-201ENST00000054666 ZNF132P52740 706 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 EIF3BP55884 814 aaKnown RBP8.79□□□□□ -1
VAMP3-201ENST00000054666 MYL6P60660 151 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 GNGT1P63211 74 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 SKOR1P84550 965 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 TNFAIP2Q03169 654 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 CALCOCO2Q13137 446 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 UAP1Q16222 522 aaPredicted RBP8.79□□□□□ -1
VAMP3-201ENST00000054666 SCARA5Q6ZMJ2 495 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 KDM7AQ6ZMT4 941 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 PHLDB2Q86SQ0 1253 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 HOOK3Q86VS8 718 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 CPNE8Q86YQ8 564 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 RHOT1Q8IXI2 618 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 SH2D3CQ8N5H7 860 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 TMEM35BQ8NCS4 154 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 NFKBIZQ9BYH8 718 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 FZD8Q9H461 694 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 ZNF408Q9H9D4 720 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 TMBIM4Q9HC24 238 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 PTPN22Q9Y2R2 807 aa8.79□□□□□ -1
VAMP3-201ENST00000054666 ABLIM1O14639 778 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 TLR3O15455 904 aaKnown RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 MAGEB2O15479 319 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 B4GALT4O60513 344 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 PPFIA2O75334 1257 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 C22orf31O95567 290 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 HOXC6P09630 235 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 RARAP10276 462 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CETPP11597 493 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 TMOD1P28289 359 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ADORA2AP29274 412 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 FLT3P36888 993 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 OSTNP61366 133 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 MBTD1Q05BQ5 628 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ARHGAP1Q07960 439 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZNF844Q08AG5 666 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 PTP4A2Q12974 167 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 C2CD6Q53TS8 623 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ODF2Q5BJF6 829 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 LDLRAD1Q5T700 205 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 DENND2CQ68D51 928 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 PLEKHA7Q6IQ23 1121 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 DNAJC24Q6P3W2 148 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 TTC27Q6P3X3 843 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 UBR7Q8N806 425 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZNF606Q8WXB4 792 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZNF668Q96K58 619 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 SCLT1Q96NL6 688 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 TRIM7Q9C029 511 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CDT1Q9H211 546 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 LRRC19Q9H756 370 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 PDGFCQ9NRA1 345 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 HOMER3Q9NSC5 361 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CISHQ9NSE2 258 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZDHHC18Q9NUE0 388 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 IP6K2Q9UHH9 426 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 AKT3Q9Y243 479 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 TNFSF13BQ9Y275 285 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZSWIM8A7E2V4 1837 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 COL1A2P08123 1366 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 PLXNA1Q9UIW2 1896 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 SCN4AP35499 1836 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 TCRBV7S2A1N4TA0A589 114 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 UNCXA6NJT0 531 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 FSCN2O14926 492 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 EIF3HO15372 352 aaKnown RBP eCLIP8.78□□□□□ -1
VAMP3-201ENST00000054666 B4GALT5O43286 388 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZEB2O60315 1214 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 GAS8O95995 478 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CST3P01034 146 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 GJB1P08034 283 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 KRT19P08727 400 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CXCL8P10145 99 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 BRD2P25440 801 aaKnown RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 SSTR3P32745 418 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 GJA5P36382 358 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 GJC1P36383 396 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 RPL21P46778 160 aaKnown RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 CDR1P51861 262 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 PMS2P54278 862 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 LACTBP83111 547 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 TAP1Q03518 808 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 MAMLD1Q13495 774 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 KRT71Q3SY84 523 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZNF667Q5HYK9 610 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZFYVE27Q5T4F4 411 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 SYDE1Q6ZW31 735 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 PNMA8AQ86V59 439 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 PPTC7Q8NI37 304 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 FEZF2Q8TBJ5 459 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 FBXO25Q8TCJ0 367 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CCDC114Q96M63 670 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ZNF518BQ9C0D4 1074 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms