RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 CUL2Q13617 745 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 SIX1Q15475 284 aaPredicted RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 ATP13A4Q4VNC1 1196 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 CCT6BQ92526 530 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 COPS5Q92905 334 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ACSF2Q96CM8 615 aaPredicted RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 TLCD1Q96CP7 247 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 DDX23Q9BUQ8 820 aaKnown RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 ADAM22Q9P0K1 906 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 R3HDM2Q9Y2K5 976 aaKnown RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 FAM187AA6NFU0 413 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 PI4K2BG5E9Z4 385 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ATP2A1O14983 1001 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ARL2P36404 184 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 LBX2Q6XYB7 198 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 THNSL1Q8IYQ7 743 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 RBBP8NLQ8NC74 664 aaPredicted RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 MTMR12Q9C0I1 747 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ASIC3Q9UHC3 531 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 WDR81Q562E7 1941 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 WEE2P0C1S8 567 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 NAMPTP43490 491 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 RTP1P59025 263 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 NCOA4Q13772 614 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 TTLL12Q14166 644 aaPredicted RBP13.96□□□□□ -0.17
CTNS-201ENST00000046640 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 KAZNQ674X7 775 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 RNF149Q8NC42 400 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 GDAP1Q8TB36 358 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 N4BP2L2Q92802 583 aaPredicted RBP13.96□□□□□ -0.17
CTNS-201ENST00000046640 ADAM7Q9H2U9 754 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 DOCK1Q14185 1865 aa13.96□□□□□ -0.17
CTNS-201ENST00000046640 A0A0B4J269 797 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 CCT8L1PA6NM43 557 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 MTA2O94776 668 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 TCF4P15884 667 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.18
CTNS-201ENST00000046640 EIF3BP55884 814 aaKnown RBP13.96□□□□□ -0.18
CTNS-201ENST00000046640 TAS2R40P59535 323 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 KRT17Q04695 432 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 ZKSCAN8Q15776 578 aaPredicted RBP13.96□□□□□ -0.18
CTNS-201ENST00000046640 SGSM3Q96HU1 749 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 NLRP4Q96MN2 994 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 TXLNGYQ9BZA5 131 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 SPATC1LQ9H0A9 340 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 ABCF3Q9NUQ8 709 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 CTNNAL1Q9UBT7 734 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 TBK1Q9UHD2 729 aa13.96□□□□□ -0.18
CTNS-201ENST00000046640 ECEL1O95672 775 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 RALAP11233 206 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 RPL7AP62424 266 aaKnown RBP13.95□□□□□ -0.18
CTNS-201ENST00000046640 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
CTNS-201ENST00000046640 ORC1Q13415 861 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 ANKS1BQ7Z6G8 1248 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 RHPN2Q8IUC4 686 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 ANKS4BQ8N8V4 417 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 CEP120Q8N960 986 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 CNOT10Q9H9A5 744 aaKnown RBP13.95□□□□□ -0.18
CTNS-201ENST00000046640 NRBP2Q9NSY0 501 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 SAMD15Q9P1V8 674 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 PCYOX1Q9UHG3 505 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 CSADQ9Y600 493 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 RASGRF2O14827 1237 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 MYL6P60660 151 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 IGBP1P78318 339 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 Q3C1V9 767 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 ATXN2LQ8WWM7 1075 aaKnown RBP13.95□□□□□ -0.18
CTNS-201ENST00000046640 THOC1Q96FV9 657 aaKnown RBP13.95□□□□□ -0.18
CTNS-201ENST00000046640 TXNRD2Q9NNW7 524 aa13.95□□□□□ -0.18
CTNS-201ENST00000046640 MTRF1LQ9UGC7 380 aaKnown RBP13.95□□□□□ -0.18
CTNS-201ENST00000046640 ZNFX1Q9P2E3 1918 aaKnown RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 H0YCG3 227 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 NOP56O00567 594 aaKnown RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 STAM2O75886 525 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 ATG7O95352 703 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 BRD2P25440 801 aaKnown RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 GJC2Q5T442 439 aaPredicted RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 ENOSF1Q7L5Y1 443 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 DNERQ8NFT8 737 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 ZNF317Q96PQ6 595 aaPredicted RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 KIAA1586Q9HCI6 787 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 PODXLO00592 558 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 TLR3O15455 904 aaKnown RBP13.94□□□□□ -0.18
CTNS-201ENST00000046640 B4GALT5O43286 388 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 ADCY3O60266 1144 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 PAEPP09466 180 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 KRT10P13645 584 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 CHKAP35790 457 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 PSMC4P43686 418 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 PLCB4Q15147 1175 aa13.94□□□□□ -0.18
CTNS-201ENST00000046640 TCEAL1Q15170 157 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms