RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Cyp4f16Q99N17 524 aa10.52□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Trpd52l3Q9CQ14 231 aa10.52□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Olfr292F8VQ84 308 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Tsc22d1P62500 1077 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Pstpip1P97814 415 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Fam102aQ78T81 392 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 AopepQ8BXQ6 817 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 A430089I19RikQ8C9W1 407 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Tube1Q9D6T1 475 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Trpc5Q9QX29 975 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Phtf1Q9QZ09 761 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Pou6f1Q07916 301 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Fbxw7Q8VBV4 629 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ces1Q8VCC2 565 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ndufa10Q99LC3 355 aaKnown RBP10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Psmd9Q9CR00 222 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Gtf2iQ9ESZ8 998 aaKnown RBP10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Tagln3Q9R1Q8 199 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Spag17Q5S003 2320 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Gm13084A2A8N0 494 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Pou5f1P20263 352 aaKnown RBP10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Papd7Q6PB75 542 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 SnphQ80U23 495 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Rnf103Q9R1W3 683 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Usp31E9Q6Y8 1344 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Serpinb3cA2RSF9 386 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Tatdn3Q3U1C6 294 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 C2cd2lQ80X80 706 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Mzt2Q9CQ25 159 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Klhl28Q9CR40 571 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Mrps15Q9DC71 258 aaKnown RBP10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 SmapQ9R0P4 181 aaKnown RBP10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Simc1E9Q6E9 1354 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Rtn2O70622 471 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Foxred2Q3USW5 665 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Cep44Q5HZK1 386 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 9930111J21Rik1Q5SVP0 844 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ncoa4Q5U4H9 625 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 CyldQ80TQ2 952 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Fbxo44Q8BK26 255 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ston1Q8CDJ8 730 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 OoepQ9CWE6 164 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Psmd12Q9D8W5 456 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Fem1bQ9Z2G0 627 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Samd11Q1RNF8 542 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Znf451Q8C0P7 1056 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Erap1Q9EQH2 930 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Large1Q9Z1M7 756 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Plekhg4A0A1L1SU27 1217 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Gimd1E9PW74 217 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ppargc1aO70343 797 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Man1a1P45700 655 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Kcna2P63141 499 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Yy1Q00899 414 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 PRAG1Q571I4 1179 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ppp1r13lQ5I1X5 824 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Dennd2aQ8C4S8 1000 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Cnga3Q9JJZ8 631 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Cyb5rlB1AS42 316 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Speer4eK7N6S8 255 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Alppl2P24823 529 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Carmil2Q3V3V9 1296 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Fhod1Q6P9Q4 1197 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Gga3Q8BMI3 718 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Mill1Q8HWE7 395 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Psma4Q9R1P0 261 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ptpn4Q9WU22 926 aa10.51□□□□□ -0.73
Col6a5-203ENSMUST00000190193 NhsB1AV60 1647 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 C87977A2A958 498 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 FcgrtQ61559 365 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Acap3Q6NXL5 833 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Depdc7Q91WS7 511 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ddx28Q9CWT6 540 aaKnown RBP10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ptk2bQ9QVP9 1009 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Hao1Q9WU19 370 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Rbck1Q9WUB0 508 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Foxm1O08696 760 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 BlmhQ8R016 455 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Rmnd5bQ91YQ7 393 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Cox16Q9CR63 106 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Maged2Q9ER67 616 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Jph2Q9ET78 696 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Sucla2Q9Z2I9 463 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Mxi1P50540 228 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 CcnjlQ5SRT8 387 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 DcstampQ7TNJ0 470 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Atp6v0d2Q80SY3 350 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ttc7aQ8BGB2 858 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 SgczQ8BX51 311 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ifi206G3UZV2 921 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Ssxb5Q6XAS2 159 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Snx17Q8BVL3 470 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Eaf2Q91ZD6 262 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Mrpl4Q9DCU6 294 aaKnown RBP10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Sgpp1Q9JI99 430 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 TnrQ8BYI9 1358 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Zfp626A0A0U1RQ84 676 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 PdgfraP26618 1089 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 SftpdP50404 374 aa10.5□□□□□ -0.73
Col6a5-203ENSMUST00000190193 Vwa3aQ3UVV9 1148 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms