RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Igf2bp3Q9CPN8 579 aaKnown RBP29.51■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ddx56Q9D0R4 546 aaKnown RBP29.51■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Coro7Q9D2V7 922 aa29.51■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Wdr83Q9DAJ4 315 aaKnown RBP29.51■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Anxa9Q9JHQ0 345 aa29.51■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Snx27Q3UHD6 539 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Camta2Q80Y50 1208 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 L3mbtl3Q8BLB7 883 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Themis2Q91YX0 663 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Stk32bQ9JJX8 414 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Cetn2Q9R1K9 172 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ggt5Q9Z2A9 573 aa29.5■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tldc2A2ACG1 198 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Impa1O55023 277 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ccr1P51675 355 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 PkmP52480 531 aaKnown RBP29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Foxp2P58463 714 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Kctd19Q562E2 927 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Vat1lQ80TB8 417 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Fam43aQ8BUP8 424 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Il31raQ8K5B1 716 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Thap12Q9CUX1 758 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 ParvaQ9EPC1 372 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Igdcc4Q9EQS9 1252 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Rabgap1A2AWA9 1064 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ccdc152E9PX14 254 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 IapP03975 557 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Rpl7aP12970 266 aaKnown RBP29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Krt19P19001 403 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 HarsQ61035 509 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tmem132cQ8CEF9 1099 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Stxbp5Q8K400 1152 aaKnown RBP29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 B4galt5Q9JMK0 388 aa29.49■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Atf2P16951 487 aaKnown RBP29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Kif5cP28738 956 aaKnown RBP29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Cracr2aQ3UP38 310 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Kdm1bQ8CIG3 826 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Snf8Q9CZ28 258 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tmod1P49813 359 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Arhgap44Q5SSM3 814 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Rpf1Q7TND5 349 aaKnown RBP29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tdp1Q8BJ37 609 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Taf2Q8C176 1104 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Cog3Q8CI04 820 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tti1Q91V83 1085 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tbx20Q9ES03 445 aa29.48■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Zscan4-ps1A0A1C7CYV3 506 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Zscan4dA7KBS4 506 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Trappc3O55013 180 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Marcksl1P28667 200 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Clcn3P51791 818 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Stmn4P63042 189 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Zscan4fQ3URS2 506 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Cyp3a16Q64481 504 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Bank1Q80VH0 783 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Zscan4cQ80VJ6 506 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Enoph1Q8BGB7 257 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 DpysQ9EQF5 519 aa29.47■■■□□ 2.31
Ldb1-208ENSMUST00000185355 C2cd2E9Q3C1 696 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 RxrbP28704 520 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 PighQ5M9N4 188 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Dis3Q9CSH3 958 aaKnown RBP29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 MlklQ9D2Y4 472 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 1700064H15RikD3Z4D4 81 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ndufs6P52503 116 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Igsf9Q05BQ1 1179 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Mrgprb1Q3UG61 350 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Rnf10Q3UIW5 804 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Fam198aQ3UY90 562 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Gm5168Q4KL04 211 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Vps41Q5KU39 853 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Bmp3Q8BHE5 468 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Cfap36Q8C6E0 343 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ube2q2Q8K2Z8 378 aa29.46■■■□□ 2.31
Ldb1-208ENSMUST00000185355 SktA2AQ25 1946 aaKnown RBP29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Tbc1d16A2ABG4 766 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Rfx8D3YU81 596 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 CopeO89079 308 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 PrkchP23298 683 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ppm1jQ149T7 507 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Olfm4Q3UZZ4 505 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Arhgap1Q5FWK3 439 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Wdr44Q6NVE8 915 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Slc26a7Q8R2Z3 656 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 McmbpQ8R3C0 642 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Slc35f6Q8VE96 372 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Abcf2Q99LE6 628 aaKnown RBP29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Ebag9Q9D0V7 213 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Smok2bQ9QYZ3 484 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Smok2aQ9QYZ6 504 aa29.45■■■□□ 2.31
Ldb1-208ENSMUST00000185355 Klc1O88447 541 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 AfpP02772 605 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Adcy8P97490 1249 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Il6stQ00560 917 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Zswim6Q80TB7 1207 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Wdtc1Q80ZK9 677 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Slitrk1Q810C1 696 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Tom1l1Q923U0 474 aa29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 CmasQ99KK2 432 aaKnown RBP29.44■■■□□ 2.3
Ldb1-208ENSMUST00000185355 Slc25a11Q9CR62 314 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms