RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Epn2Q8CHU3 595 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 GckrQ91X44 587 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Marc2Q922Q1 338 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Slc39a3Q99K24 317 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cyp4f16Q99N17 524 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Wdr45bQ9CR39 344 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Thg1lQ9CY52 298 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tmem81Q9D5K1 259 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Zfyve19Q9DAZ9 389 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 IvdQ9JHI5 424 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Kcnq5Q9JK45 933 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Bfsp1A2AMT1 669 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cyp2a22B2RXZ2 492 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Zar1lC3VD30 291 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm3488M0QW81 238 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Pdlim1O70400 327 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Fgd3O88842 733 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Myd88P22366 296 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 HdcP23738 662 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 PlaaP27612 794 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Hoxc10P31257 342 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Kcnj8P97794 424 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Aars2Q14CH7 980 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cnnm2Q3TWN3 875 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Spag6Q3V0U9 509 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 P4ha1Q60715 534 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Arhgef2Q60875 985 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ppp2r5bQ6PD28 497 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ush1gQ80T11 461 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Catsper3Q80W99 395 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 6820408C15RikQ8BJX2 354 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Nemp2Q8CB65 421 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Kbtbd4Q8R179 534 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 OlahQ8R197 265 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 FggQ8VCM7 436 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 CmasQ99KK2 432 aaKnown RBP10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Erp44Q9D1Q6 406 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tacc2Q9JJG0 1149 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Git2Q9JLQ2 708 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Hey1Q9WV93 299 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ehd1Q9WVK4 534 aaKnown RBP10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Igsf9bE9PZ19 1328 aa10.25□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm45208A0A140LJ36 292 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm13040A2A8C4 496 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm13101A2ASJ0 481 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm13119B1ARV5 481 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 KlO35082 1014 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 H2afzP0C0S6 128 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Art2aP17981 287 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Mxi1P50540 228 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Dact3Q0PHV7 610 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 H2afvQ3THW5 128 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ppp4r3cQ3V0Y1 813 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Q5EBG8 199 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Atp13a3Q5XF89 1219 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Polr2eQ80UW8 210 aaKnown RBP10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Arhgef38Q80VK6 770 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Znf598Q80YR4 908 aaKnown RBP10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Dlgap2Q8BJ42 1059 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Fsd1lQ8BYN5 507 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Lrrc41Q8K1C9 807 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Mnd1Q8K396 205 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 PhykplQ8R1K4 467 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr806Q8VFI2 313 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Llcfc1Q9D9P8 108 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Mgea5Q9EQQ9 916 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Stx12Q9ER00 274 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Sucla2Q9Z2I9 463 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Flt1P35969 1333 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ces1hD3Z298 562 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm1661E9Q963 441 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Trdmt1O55055 415 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Akap3O88987 864 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Epb41P48193 858 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 ThraP63058 492 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Pstpip1P97814 415 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 MlxipQ2VPU4 917 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Bpifb5Q3UQ05 490 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Vps41Q5KU39 853 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Glg1Q61543 1175 aaKnown RBP10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Asic1Q6NXK8 526 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr792Q7TRH9 311 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Trim14Q8BVW3 440 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Lacc1Q8BZT9 430 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ces1Q8VCC2 565 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Pofut2Q8VHI3 429 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tpgs1Q99MS8 303 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Bcl11bQ99PV8 884 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ergic2Q9CR89 377 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ppp1r3gQ9CW07 347 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Plpp6Q9D4F2 292 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 WtapQ9ER69 396 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Spag4Q9JJF2 443 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Klrc2Q9WTJ9 238 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Slc12a7Q9WVL3 1083 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 HephQ9Z0Z4 1157 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tsc22d3Q9Z2S7 137 aa10.24□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 FAM186AQ9D9R9 1790 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Robo3Q9Z2I4 1366 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Fam155bA2BDP1 471 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms