RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 VegfbP49766 207 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rad54lP70270 747 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ccdc34Q3UI66 367 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ccdc25Q78PG9 208 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Gcfc2Q8BKT3 769 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ccdc28aQ8CEI3 192 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Tdrd7Q8K1H1 1086 aaKnown RBP13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Tbc1d13Q8R3D1 400 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 TxlnbQ8VBT1 685 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Gucy2dA0A0U1RPR8 1117 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Serpinh1P19324 417 aaKnown RBP13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Sept4P28661 478 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Mmp3P28862 477 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Sh3bp2Q06649 559 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 SobpQ0P5V2 864 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Wdr41Q3UDP0 460 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ift20Q61025 132 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Trim37Q6PCX9 961 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rnaseh2bQ80ZV0 308 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Slc7a14Q8BXR1 771 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 4933409G03RikQ8C5U0 320 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Usp27Q8CEG8 438 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 H2-Q4Q8HWB2 354 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Mettl13Q91YR5 698 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Lztr1Q9CQ33 837 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rnf138rt1Q9D9M9 248 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Dydc1Q9D9T0 175 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Grk1Q9WVL4 564 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 EloblA6PWE0 161 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Lrrc73B2RWC4 316 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ptchd4B9EKX1 904 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Myo1eE9Q634 1107 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Gm6121L7MUF1 212 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ifnb1P01575 182 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 IvlP48997 467 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rhox5P52651 210 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Pou6f1Q07916 301 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Slc20a2Q80UP8 656 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Crybg3Q80W49 1005 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Lrrc4cQ8C031 640 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 A430089I19RikQ8C9W1 407 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Dhx58Q99J87 678 aa13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Orc1Q9Z1N2 840 aaKnown RBP13.19□□□□□ -0.3
Lig3-202ENSMUST00000080461 Krt28A6BLY7 462 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ccdc125Q5U465 500 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Olfr23Q7TRX4 325 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Snx17Q8BVL3 470 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Efl1Q8C0D5 1127 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Adgrg3Q8R0T6 542 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Vmn1r203Q8R273 311 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Chst7Q9EP78 484 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rtn3Q9ES97 964 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 PollQ9QXE2 573 aaKnown RBP13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Dnajc12Q9R022 198 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Gm27029A2A4P4 543 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Slc16a6B1AT66 607 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Zfp597E9Q6S0 419 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Odr4Q4PJX1 447 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Tcf4Q60722 670 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Stip1Q60864 543 aaKnown RBP13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 FntaQ61239 377 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 EsrrbQ61539 433 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Avpr1aQ62463 423 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 PnocQ64387 187 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 GopcQ8BH60 463 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ddx47Q9CWX9 455 aaKnown RBP13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 PirQ9D711 290 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ccdc91Q9D8L5 442 aa13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Igf2rQ07113 2483 aaKnown RBP13.18□□□□□ -0.3
Lig3-202ENSMUST00000080461 Osbpl9A2A8Z1 736 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Tbxas1P36423 533 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Zbtb8osQ505B7 168 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Fhod1Q6P9Q4 1197 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ttc22Q8C159 568 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Olfr393Q8VGR6 312 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Snx24Q9CRB0 169 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Cables1Q9ESJ1 568 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Angptl3Q9R182 455 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Gadd45gQ9Z111 159 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Slc6a21A0A1B0GSD2 748 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ppp4r3cQ3V0Y1 813 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Naa15Q80UM3 865 aaKnown RBP13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Bank1Q80VH0 783 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Phtf2Q8CB19 747 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 CarfQ8VHI4 689 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 VasnQ9CZT5 673 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ralgps2Q9ERD6 590 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rab27aQ9ERI2 221 aa13.17□□□□□ -0.3
Lig3-202ENSMUST00000080461 Tatdn2B7ZNL9 783 aaKnown RBP13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Pex5O09012 639 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Rpl7aP12970 266 aaKnown RBP13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 PrphP15331 475 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Klra1P20937 262 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 RarbP22605 482 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Zhx1P70121 873 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Tubb5P99024 444 aaKnown RBP13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ccdc117Q6PB51 277 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Pja2Q80U04 707 aa13.16□□□□□ -0.3
Lig3-202ENSMUST00000080461 Ints6lQ8BND4 861 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms