RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Kcna3P16390 528 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 TxkP42682 527 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Myo1fP70248 1099 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Trim38Q5SZ99 471 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 FancbQ5XJY6 703 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Clec4a4Q5YIR8 236 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cd37Q61470 281 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 HrQ61645 1182 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Tspyl5Q69ZB3 406 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ireb2Q811J3 963 aaKnown RBP12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 DcakdQ8BHC4 231 aaKnown RBP12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Trim14Q8BVW3 440 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ago2Q8CJG0 860 aaKnown RBP12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rpn1Q91YQ5 608 aaKnown RBP12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Atp6v0a4Q920R6 833 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Mov10l1Q99MV5 1187 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ngly1Q9JI78 651 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 PorcnQ9JJJ7 461 aa12.03□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ptpn20O55082 426 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cbx3P23198 183 aaKnown RBP12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Tnni3P48787 211 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 LipeP54310 759 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Olfm4Q3UZZ4 505 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Olfml2bQ3V1G4 746 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Trappc3lQ4KL14 181 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Adamts18Q4VC17 1219 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Smndc1Q8BGT7 238 aaKnown RBP12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lrrc24Q8BHA1 521 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Nop53Q8BK35 484 aaKnown RBP12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gtf3c4Q8BMQ2 817 aaKnown RBP12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Sulf1Q8K007 870 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gtse1Q8R080 741 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cst12Q9DAN8 128 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Scgb2b20Q9JI02 112 aa12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Twf2Q9Z0P5 349 aaKnown RBP12.02□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gm14525B1AZA0 212 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gm2012B1B0R1 212 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tnnc1P19123 161 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Lta4hP24527 611 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Hmgcs2P54869 508 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Kdm7aQ3UWM4 940 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gm14819Q62478 212 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Foxo6Q70KY4 559 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccdc181Q80ZU5 509 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cep57Q8CEE0 500 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Lrrc42Q8R2U7 421 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Olfr1499Q8VG65 314 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Senp2Q91ZX6 588 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rabl3Q9D4V7 236 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 IscuQ9D7P6 168 aa12.02□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccdc74aE9Q9U8 364 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rad51ap2G3UW63 976 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cops5O35864 334 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Slc8a1P70414 970 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Palb2Q3U0P1 1104 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 SpdyaQ5IBH7 310 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Sorbs1Q62417 1290 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Jade3Q6IE82 823 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rnf139Q7TMV1 668 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rnaseh2bQ80ZV0 308 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Calhm6Q8C9E8 313 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fam228aQ8CDW1 299 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Slc35b4Q8CIA5 331 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Olfr390Q8VEZ7 311 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dr1Q91WV0 176 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rnf167Q91XF4 347 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Igf2bp3Q9CPN8 579 aaKnown RBP12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Llcfc1Q9D9P8 108 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Prpf4Q9DAW6 521 aaKnown RBP12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ggps1Q9WTN0 300 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dhtkd1A2ATU0 921 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gm6121L7MUF1 212 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cdk2ap1O35207 114 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gm3414Q3TNU4 584 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 OgdhQ60597 1023 aaKnown RBP12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tmem130Q6NXM3 419 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tdpoz4Q6YCH2 370 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Plppr4Q7TME0 766 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Moxd2Q7TT41 619 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ttc22Q8C159 568 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pak2Q8CIN4 524 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Usp26Q99MX1 835 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tsnaxip1Q99P25 704 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zfp623Q9CY99 499 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rnf225Q9D7D1 332 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Capn9Q9D805 690 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 LrmdaQ9D9B4 229 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tbk1Q9WUN2 729 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 S1pr4Q9Z0L1 386 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cdr2lA2A6T1 465 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 GclmO09172 274 aaKnown RBP12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Yy1Q00899 414 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Arhgap17Q3UIA2 846 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ddr2Q62371 854 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fndc3bQ6NWW9 1207 aaKnown RBP12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Senp5Q6NXL6 749 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccdc154Q6RUT8 657 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mapk15Q80Y86 549 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Prpf31Q8CCF0 499 aaKnown RBP12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cpa5Q8R4H4 436 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms