RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Unc93b1Q8VCW4 598 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 MiosQ8VE19 875 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr1352Q8VGX5 309 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 B4galt3Q91YY2 395 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam49bQ921M7 324 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Chst12Q99LL3 419 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 GarsQ9CZD3 729 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 TtpalQ9D3D0 343 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cnot8Q9D8X5 292 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cpne8Q9DC53 577 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pdzd4Q9QY39 772 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm28036V9GXJ1 658 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fpr-rs4A4FUQ5 323 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gnrh1P13562 90 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Acvr2bP27040 536 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gjb3P28231 270 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Aldh2P47738 519 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ugt1a2P70691 533 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ptgs2Q05769 604 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ugt1a1Q63886 535 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Kiaa1841Q68FF0 718 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Arl5cQ6P068 179 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Atp1a2Q6PIE5 1020 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 PrcpQ7TMR0 491 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 SugctQ7TNE1 436 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr670Q7TRP3 312 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam205cQ80YD3 371 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fbxl5Q8C2S5 690 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam193aQ8CGI1 1231 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Klhl36Q8R124 613 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr532Q8VGT4 309 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Map4k3Q99JP0 894 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Akirin1Q99LF1 191 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rnf225Q9D7D1 332 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Mgea5Q9EQQ9 916 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dkc1Q9ESX5 509 aaKnown RBP9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Bnip3lQ9Z2F7 218 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fkbp1bQ9Z2I2 108 aa9.28□□□□□ -0.92
Trim39-201ENSMUST00000042717 Scn1aA2APX8 2009 aa9.27□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ifnb1P01575 182 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fcer2P20693 331 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tbxas1P36423 533 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Znf367Q0VDT2 340 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Frmd5Q6P5H6 517 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Wdr3Q8BHB4 942 aaKnown RBP9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Uba3Q8C878 462 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Castor2Q8CAB8 329 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Q8CD60 292 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tbx22Q8K402 517 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Scyl3Q9DBQ7 735 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Slc4a11A2AJN7 862 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cyp2b13A6H6J2 491 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Slc35g2D3YVE8 412 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm1661E9Q963 441 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm10721J3QPJ9 223 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Impa1O55023 277 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Snx12O70493 165 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Sppl2bQ3TD49 578 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ppp1r12cQ3UMT1 782 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gga1Q8R0H9 635 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ubxn1Q922Y1 297 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gins2Q9D600 185 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gtf2h1Q9DBA9 547 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Trpm5Q9JJH7 1158 aa9.27□□□□□ -0.93
Trim39-201ENSMUST00000042717 Mocs3A2BDX3 460 aaKnown RBP9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Lrrc63A6H694 637 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cyp2b23E9Q593 491 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tspyl1O88852 379 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rps6ka1P18653 724 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Trap1aP19473 224 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Oaz1P54369 227 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 HmgcrQ01237 887 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Pi4k2aQ2TBE6 479 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ppp4r3cQ3V0Y1 813 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 SpdyaQ5IBH7 310 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 VwdeQ6DFV8 926 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 ChpfQ6IQX7 774 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Mpp4Q6P7F1 635 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Reps2Q80XA6 521 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Q8CCC3 530 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gpc3Q8CFZ4 579 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Bud13Q8R149 637 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ftsj3Q9DBE9 838 aaKnown RBP9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Plxnb3Q9QY40 1902 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dennd4aE9Q8V6 1869 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Vmn2r77L7N2B7 854 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Btg4O70552 250 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ms4a1P19437 291 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 FpgsP48760 587 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 UrosP51163 265 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Pcsk1P63239 753 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ptcd3Q14C51 685 aaKnown RBP9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Klra5Q60652 266 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Slc26a2Q62273 739 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Suz12Q80U70 741 aaKnown RBP9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Hook3Q8BUK6 718 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Parp10Q8CIE4 960 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Sbk1Q8QZX0 417 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Itgbl1Q8VDV0 494 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Mob2Q8VI63 235 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 80.3 ms