RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Lmntd2Q0VET5 664 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Prmt9Q3U3W5 846 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mapk10Q61831 464 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Slc17a8Q8BFU8 601 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mettl24Q8CCB5 363 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Unc5bQ8K1S3 945 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Olfr1502Q8VG66 316 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 AslQ91YI0 464 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 CygbQ9CX80 190 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 PrameQ9D4Z5 464 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 EtfbQ9DCW4 255 aaKnown RBP11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Dlc1Q9R0Z9 1092 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ankrd31A0A140LI88 1765 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 PtenO08586 403 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 PurbO35295 324 aaKnown RBP11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 GalcP54818 684 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gngt2Q61017 69 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ptger2Q62053 362 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Krt32Q62168 407 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 IqceQ6PCQ0 778 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 1700001J03RikQ80ZR8 219 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Q8BGD0 127 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 A430089I19RikQ8C9W1 407 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Q9CR55 154 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tomm20lQ9D4V6 152 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fam162aQ9D6U8 155 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Htra2Q9JIY5 458 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Smok2bQ9QYZ3 484 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Smok2aQ9QYZ6 504 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rnf103Q9R1W3 683 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Psmd10Q9Z2X2 231 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 EsrrgP62509 458 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 LxnP70202 222 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ezh1P70351 747 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fam160a1Q505K2 1081 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tdrd5Q5VCS6 1040 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ppp1r1bQ60829 194 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Lrrc8eQ66JT1 795 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Svs3bQ8BZH8 265 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Apol9bQ8C7I4 310 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Apol9aQ8VDU3 310 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Kiaa2013Q91X21 634 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Terb2Q9D494 218 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Cse1lQ9ERK4 971 aaKnown RBP11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Homer2Q9QWW1 354 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Casz1Q9CWL2 1761 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm9774A0A0A6YVU8 407 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm10406A6NAS4 205 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3373A6NAS7 205 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3252E9PUT9 216 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3002E9PW72 216 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3298E9PW80 205 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3468E9QAJ8 216 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3667K7N757 205 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3264L7N2C5 238 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pgk2P09041 417 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pitpnm3Q3UHE1 974 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3558Q5FWC9 205 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Arhgap30Q640N3 1101 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Serpinb3dQ6UKZ0 387 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mtrf1lQ8BJU9 373 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Amhr2Q8K592 568 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Caap1Q8VDY9 356 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 MlphQ91V27 590 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pcdhga10Q91XY9 930 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sf3b3Q921M3 1217 aaKnown RBP11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tssk3Q9D2E1 268 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Nxnl2Q9D531 156 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Nme3Q9WV85 169 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fbxl16A2RT62 479 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Bmp2P21274 394 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Usp10P52479 792 aaKnown RBP11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ripk2P58801 539 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 FdxrQ61578 494 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zcchc2Q69ZB8 1166 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ankrd6Q69ZU8 712 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 P2ry10Q8BFU7 328 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Nat14Q8BVG8 206 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Hdac7Q8C2B3 938 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 PygbQ8CI94 843 aaKnown RBP11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Znf426Q8R1D1 550 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 ClyblQ8R4N0 338 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rpap2Q8VC34 614 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 YarsQ91WQ3 528 aaKnown RBP11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tsc1Q9EP53 1161 aa11.21□□□□□ -0.61
Rnf40-201ENSMUST00000033088 4931408C20RikE9PWP9 1381 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Plekhg4A0A1L1SU27 1217 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rfpl4bJ3QPR6 266 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 AfpP02772 605 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Pms2P54279 859 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Srrm1Q52KI8 946 aaKnown RBP11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Vmn1r209Q5NC97 312 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Myo1gQ5SUA5 1024 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Olfr301Q7TS04 311 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Kbtbd3Q8BHI4 607 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dennd1aQ8K382 1016 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Defb15Q8R2I5 79 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Atxn7Q8R4I1 867 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Retreg1dQ8VE91 480 aa11.21□□□□□ -0.62
Rnf40-201ENSMUST00000033088 HnrnprQ8VHM5 632 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms