RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Zcchc7B1AX39 541 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 F830016B08RikG3UWE2 416 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Galnt3P70419 633 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 4930430A15RikQ05AC5 485 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Krt40Q6IFX3 439 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Klhl18A0A0G2JGN5 579 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmem132bF7BAB2 1078 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmem120bQ3TA38 339 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Carmil2Q3V3V9 1296 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 CrebzfQ91ZR3 358 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dis3Q9CSH3 958 aaKnown RBP14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Capn9Q9D805 690 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Olfr711Q9EPG2 314 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Kdm7aQ3UWM4 940 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Oca2Q62052 833 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ubash3bQ8BGG7 638 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sulf1Q8K007 870 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nsl1Q8K305 281 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3252E9PUT9 216 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm2956E9PVJ0 216 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3002E9PW72 216 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3468E9QAJ8 216 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm8108K7N734 216 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3739L7N296 216 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3164L7N2B9 238 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm3488M0QW81 238 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Adcy6Q01341 1165 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Anapc2Q8BZQ7 837 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pnma1Q8C1C8 353 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Xpo6Q924Z6 1125 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Mbd2Q9Z2E1 414 aa14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rbm6S4R1W5 1118 aaKnown RBP14.56□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Adamts12Q811B3 1600 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cdh15P33146 784 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 MarsQ68FL6 902 aaKnown RBP14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rsbn1Q80T69 795 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rbm12b1Q80YR9 836 aaKnown RBP14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gpc5Q8CAL5 572 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PiguQ8K358 434 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 OafQ8QZR4 282 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cyp2c37P56654 490 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Prkaa1Q5EG47 559 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 TfrcQ62351 763 aaKnown RBP14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Btnl1Q7TST0 509 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tbc1d22bQ80VE5 505 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Zfp317Q8C0Q5 607 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 TrabdQ99JY4 376 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Capn7Q9R1S8 813 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Yeats2Q3TUF7 1407 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cdk5rap2Q8K389 1822 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tbkbp1A2A9T0 611 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Arhgef26D3YYY8 869 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 CybbQ61093 570 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Mapre2Q8R001 326 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pglyrp2Q8VCS0 530 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pdcd10Q8VE70 212 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nmd3Q99L48 503 aaKnown RBP14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ccdc85aQ5SP85 500 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Chi3l1Q61362 389 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Upb1Q8VC97 393 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cd248Q91V98 765 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Psrc1Q9D0P7 329 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rhox3fA2ANE1 215 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Hoxa13Q62424 386 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Npdc1Q64322 332 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Luzp2Q8BGY3 345 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tubgcp4Q9D4F8 667 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Scgb2b18A0A087WPA9 112 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fosl2P47930 326 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Serping1P97290 504 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Odr4Q4PJX1 447 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Eme1Q8BJW7 570 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rd3Q8BRE0 195 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ap3m2Q8R2R9 418 aa14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Q9D937 123 aaKnown RBP14.55□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Skint11A7XV14 364 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tbc1d10bQ8BHL3 798 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 ArcQ9WV31 396 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Myh3P13541 1940 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 A0A1Y7VIU7 259 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 E230025N22RikG5E8S3 482 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pou6f1Q07916 301 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rexo4Q6PAQ4 432 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 DarsQ922B2 501 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Slc24a3Q99PD7 645 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 ThegQ9JMB1 375 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ankfn1A0A140LIW7 1083 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm9992B2RWK3 458 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Vmn2r71L7N2D8 855 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Hk2O08528 917 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tfcp2l1Q3UNW5 479 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Unc93aQ710D3 458 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rusc1Q8BG26 893 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Scfd1Q8BRF7 639 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 AbraQ8BUZ1 375 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 NbnQ9R207 751 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rrm2P11157 390 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Npas2P97460 816 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm10392Q3V3I3 114 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ankrd13aQ80UP5 588 aa14.54□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms