RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Myl2P51667 166 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Eif3eP60229 445 aaKnown RBP9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Erbb2P70424 1256 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 GabpaQ00422 454 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Gprin1Q3UNH4 932 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Fam102aQ78T81 392 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Rps6ka6Q7TPS0 764 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Atp6v0d2Q80SY3 350 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Pgrmc2Q80UU9 217 aaKnown RBP9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Calhm4Q8CE93 315 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Pkn3Q8K045 878 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Stard7Q8R1R3 373 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Znf445Q8R2V3 986 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Krt5Q922U2 580 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Tcirg1Q9JHF5 834 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Dach1Q9QYB2 751 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Akt3Q9WUA6 479 aa9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 PygmQ9WUB3 842 aaKnown RBP9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 NesQ6P5H2 1864 aaKnown RBP9.98□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Prdm12A2AJ77 365 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Pdzrn4E9PUZ9 1014 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Gm3371F7CQW8 167 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Taf4bG5E8Z2 855 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Exoc7O35250 697 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 AfpP02772 605 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 KitP05532 979 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Tsta3P23591 321 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Lrrn4P59383 733 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Yy1Q00899 414 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Q3UJP5 209 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Lgr6Q3UVD5 967 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Klra4Q60651 263 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Gpatch2lQ6PE65 482 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Trappc12Q8K2L8 797 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Lrrc42Q8R2U7 421 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 BrdtQ91Y44 956 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Sec14l2Q99J08 403 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Sppl3Q9CUS9 384 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Card9A2AIV8 536 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 PtproE9Q612 1226 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Gm15448F6PZL4 682 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Dync1i2O88487 612 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 AaasP58742 546 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Actr2P61161 394 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 GsapQ3TCV3 858 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Cyp2j11Q3UNV2 504 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 CcnjlQ5SRT8 387 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Rpf1Q7TND5 349 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Zswim6Q80TB7 1207 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 CcnyQ8BGU5 341 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Olfml3Q8BK62 406 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Mettl24Q8CCB5 363 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 ParvaQ9EPC1 372 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Slc5a4aQ9ET37 656 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Myh3P13541 1940 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 C130060K24RikG3UWA8 416 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Itgb5O70309 798 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Camk4P08414 469 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Abi2P62484 446 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ttc39dQ0VF76 604 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Abl2Q4JIM5 1182 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Adamts18Q4VC17 1219 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Nudt16Q6P3D0 195 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Znf12Q7TSI0 686 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ankzf1Q80UU1 748 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Zfp454Q80Y34 536 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Znf618Q80YY7 953 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Usp20Q8C6M1 916 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Dclre1bQ8C7W7 541 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Kbtbd13Q8C828 458 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ugt3a2Q8JZZ0 523 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Zbtb44Q8R0A2 453 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Q8R1Y2 203 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Atp2a1Q8R429 994 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ccdc65Q8VHI7 493 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Xpo5Q924C1 1204 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Tpd52l2Q9CYZ2 220 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Olig1Q9JKN5 260 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 HnrnpcQ9Z204 313 aaKnown RBP9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ubr2Q6WKZ8 1755 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Gm3424L7N298 263 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Gm8246M0QWX9 263 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Banf1O54962 89 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Bcat1P24288 386 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Sstr1P30873 391 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Psmc4P54775 418 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Tab3Q571K4 716 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Prm3Q62100 101 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Acot5Q6Q2Z6 421 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ubap1Q8BH48 502 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Lman1lQ8VCD3 505 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Xpo7Q9EPK7 1087 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Znf354bQ9QXT9 601 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Net1Q9Z206 595 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Krt27Q9Z320 448 aa9.97□□□□□ -0.81
Col6a1-201ENSMUST00000001147 RptorQ8K4Q0 1335 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Tbc1d16A2ABG4 766 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Magea4F2Z493 315 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 PorP37040 678 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Msh2P43247 935 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms