RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ABCC1P33527 1531 aa18.19■□□□□ 0.5
PHGDH-233ENST00000642021 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-233ENST00000642021 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
PHGDH-233ENST00000642021 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-233ENST00000642021 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
PHGDH-233ENST00000642021 LAS1LQ9Y4W2 734 aaKnown RBP18.17■□□□□ 0.5
PHGDH-233ENST00000642021 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
PHGDH-233ENST00000642021 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
PHGDH-233ENST00000642021 PTPRTO14522 1441 aa18.16■□□□□ 0.5
PHGDH-233ENST00000642021 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
PHGDH-233ENST00000642021 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
PHGDH-233ENST00000642021 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-233ENST00000642021 TRPM2O94759 1503 aa18.15■□□□□ 0.5
PHGDH-233ENST00000642021 SCAPERQ9BY12 1400 aa18.14■□□□□ 0.49
PHGDH-233ENST00000642021 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
PHGDH-233ENST00000642021 SLFN5Q08AF3 891 aa18.13■□□□□ 0.49
PHGDH-233ENST00000642021 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
PHGDH-233ENST00000642021 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
PHGDH-233ENST00000642021 CLTCL1P53675 1640 aa18.13■□□□□ 0.49
PHGDH-233ENST00000642021 SYNMO15061 1565 aa18.11■□□□□ 0.49
PHGDH-233ENST00000642021 APAF1O14727 1248 aa18.11■□□□□ 0.49
PHGDH-233ENST00000642021 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
PHGDH-233ENST00000642021 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
PHGDH-233ENST00000642021 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
PHGDH-233ENST00000642021 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
PHGDH-233ENST00000642021 SPHKAPQ2M3C7 1700 aa18.1■□□□□ 0.49
PHGDH-233ENST00000642021 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
PHGDH-233ENST00000642021 KIF3BO15066 747 aa18.1■□□□□ 0.49
PHGDH-233ENST00000642021 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
PHGDH-233ENST00000642021 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
PHGDH-233ENST00000642021 CENPQQ7L2Z9 268 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-233ENST00000642021 NEFMP07197 916 aa18.08■□□□□ 0.49
PHGDH-233ENST00000642021 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.49
PHGDH-233ENST00000642021 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
PHGDH-233ENST00000642021 UHRF1BP1LA0JNW5 1464 aa18.08■□□□□ 0.48
PHGDH-233ENST00000642021 UBE2Q2Q8WVN8 375 aa18.08■□□□□ 0.48
PHGDH-233ENST00000642021 MYOM1P52179 1685 aa18.07■□□□□ 0.48
PHGDH-233ENST00000642021 BCAR3O75815 825 aa18.07■□□□□ 0.48
PHGDH-233ENST00000642021 CEP152O94986 1710 aa18.07■□□□□ 0.48
PHGDH-233ENST00000642021 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
PHGDH-233ENST00000642021 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
PHGDH-233ENST00000642021 UGGT1Q9NYU2 1555 aa18.05■□□□□ 0.48
PHGDH-233ENST00000642021 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-233ENST00000642021 ERVK-7P63135 1459 aa18.04■□□□□ 0.48
PHGDH-233ENST00000642021 C8orf34Q49A92 452 aa18.04■□□□□ 0.48
PHGDH-233ENST00000642021 KANK1Q14678 1352 aa18.03■□□□□ 0.48
PHGDH-233ENST00000642021 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
PHGDH-233ENST00000642021 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
PHGDH-233ENST00000642021 TET3O43151 1660 aa18.02■□□□□ 0.48
PHGDH-233ENST00000642021 RGS3P49796 1198 aa18.02■□□□□ 0.47
PHGDH-233ENST00000642021 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
PHGDH-233ENST00000642021 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
PHGDH-233ENST00000642021 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
PHGDH-233ENST00000642021 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
PHGDH-233ENST00000642021 USP35Q9P2H5 1018 aa18■□□□□ 0.47
PHGDH-233ENST00000642021 ATP7AQ04656 1500 aa18■□□□□ 0.47
PHGDH-233ENST00000642021 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
PHGDH-233ENST00000642021 FANCAO15360 1455 aa18■□□□□ 0.47
PHGDH-233ENST00000642021 E9PSI1 815 aa17.99■□□□□ 0.47
PHGDH-233ENST00000642021 ARAP3Q8WWN8 1544 aa17.99■□□□□ 0.47
PHGDH-233ENST00000642021 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
PHGDH-233ENST00000642021 IGHDP01880 384 aa17.97■□□□□ 0.47
PHGDH-233ENST00000642021 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
PHGDH-233ENST00000642021 MAP3K4Q9Y6R4 1608 aa17.97■□□□□ 0.47
PHGDH-233ENST00000642021 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
PHGDH-233ENST00000642021 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-233ENST00000642021 KIAA1210Q9ULL0 1709 aa17.96■□□□□ 0.47
PHGDH-233ENST00000642021 MROH1Q8NDA8 1641 aa17.96■□□□□ 0.47
PHGDH-233ENST00000642021 WWC1Q8IX03 1113 aa17.96■□□□□ 0.46
PHGDH-233ENST00000642021 MYOM2P54296 1465 aa17.96■□□□□ 0.46
PHGDH-233ENST00000642021 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-233ENST00000642021 SLC12A5Q9H2X9 1139 aa17.94■□□□□ 0.46
PHGDH-233ENST00000642021 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
PHGDH-233ENST00000642021 ADGRL1O94910 1474 aa17.94■□□□□ 0.46
PHGDH-233ENST00000642021 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
PHGDH-233ENST00000642021 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
PHGDH-233ENST00000642021 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
PHGDH-233ENST00000642021 NEURL4Q96JN8 1562 aa17.92■□□□□ 0.46
PHGDH-233ENST00000642021 POLR3AO14802 1390 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-233ENST00000642021 RRP7AQ9Y3A4 280 aaKnown RBP17.92■□□□□ 0.46
PHGDH-233ENST00000642021 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-233ENST00000642021 NFKBIBQ15653 356 aa17.92■□□□□ 0.46
PHGDH-233ENST00000642021 ABCA9Q8IUA7 1624 aa17.92■□□□□ 0.46
PHGDH-233ENST00000642021 NOS1P29475 1434 aa17.92■□□□□ 0.46
PHGDH-233ENST00000642021 COG6Q9Y2V7 657 aa17.91■□□□□ 0.46
PHGDH-233ENST00000642021 TMEM132EQ6IEE7 984 aa17.91■□□□□ 0.46
PHGDH-233ENST00000642021 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
PHGDH-233ENST00000642021 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
PHGDH-233ENST00000642021 NRXN1Q9ULB1 1477 aa17.9■□□□□ 0.46
PHGDH-233ENST00000642021 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
PHGDH-233ENST00000642021 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
PHGDH-233ENST00000642021 SBNO2Q9Y2G9 1366 aa17.89■□□□□ 0.46
PHGDH-233ENST00000642021 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
PHGDH-233ENST00000642021 EFCAB6Q5THR3 1501 aa17.89■□□□□ 0.45
PHGDH-233ENST00000642021 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
PHGDH-233ENST00000642021 TCP11L2Q8N4U5 519 aa17.87■□□□□ 0.45
PHGDH-233ENST00000642021 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-233ENST00000642021 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
PHGDH-233ENST00000642021 CGNL1Q0VF96 1302 aa17.87■□□□□ 0.45
PHGDH-233ENST00000642021 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms