RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
PHGDH-228ENST00000641847 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
PHGDH-228ENST00000641847 CHIC2Q9UKJ5 165 aa14.08□□□□□ -0.16
PHGDH-228ENST00000641847 EIF2AK4Q9P2K8 1649 aaKnown RBP14.07□□□□□ -0.16
PHGDH-228ENST00000641847 KANK1Q14678 1352 aa14.07□□□□□ -0.16
PHGDH-228ENST00000641847 ANKRD30AQ9BXX3 1397 aa14.07□□□□□ -0.16
PHGDH-228ENST00000641847 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
PHGDH-228ENST00000641847 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
PHGDH-228ENST00000641847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.165e-16■■□□□ 13.6
PHGDH-228ENST00000641847 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-228ENST00000641847 EFCAB6Q5THR3 1501 aa14.05□□□□□ -0.16
PHGDH-228ENST00000641847 ATF3P18847 181 aa14.04□□□□□ -0.16
PHGDH-228ENST00000641847 IDI1Q13907 227 aa14.04□□□□□ -0.16
PHGDH-228ENST00000641847 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
PHGDH-228ENST00000641847 NAIPQ13075 1403 aa14.04□□□□□ -0.16
PHGDH-228ENST00000641847 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
PHGDH-228ENST00000641847 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
PHGDH-228ENST00000641847 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
PHGDH-228ENST00000641847 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.16
PHGDH-228ENST00000641847 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-228ENST00000641847 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-228ENST00000641847 PPP1R15AO75807 674 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-228ENST00000641847 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-228ENST00000641847 LRP6O75581 1613 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 SLC52A1Q9NWF4 448 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 CEP152O94986 1710 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
PHGDH-228ENST00000641847 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
PHGDH-228ENST00000641847 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
PHGDH-228ENST00000641847 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
PHGDH-228ENST00000641847 TET3O43151 1660 aa14□□□□□ -0.17
PHGDH-228ENST00000641847 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
PHGDH-228ENST00000641847 AFF2P51816 1311 aa13.99□□□□□ -0.17
PHGDH-228ENST00000641847 RBM6P78332 1123 aaKnown RBP13.99□□□□□ -0.17
PHGDH-228ENST00000641847 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-228ENST00000641847 NWD1Q149M9 1564 aa13.99□□□□□ -0.17
PHGDH-228ENST00000641847 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
PHGDH-228ENST00000641847 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
PHGDH-228ENST00000641847 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
PHGDH-228ENST00000641847 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
PHGDH-228ENST00000641847 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
PHGDH-228ENST00000641847 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.18
PHGDH-228ENST00000641847 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
PHGDH-228ENST00000641847 TBX22Q9Y458 520 aa13.95□□□□□ -0.18
PHGDH-228ENST00000641847 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
PHGDH-228ENST00000641847 UNC13BO14795 1591 aa13.94□□□□□ -0.18
PHGDH-228ENST00000641847 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
PHGDH-228ENST00000641847 LRRC59Q96AG4 307 aaKnown RBP13.94□□□□□ -0.18
PHGDH-228ENST00000641847 AHDC1Q5TGY3 1603 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-228ENST00000641847 SHPRHQ149N8 1683 aa13.93□□□□□ -0.18
PHGDH-228ENST00000641847 ADGRB3O60242 1522 aa13.93□□□□□ -0.18
PHGDH-228ENST00000641847 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
PHGDH-228ENST00000641847 RGS12O14924 1447 aa13.91□□□□□ -0.18
PHGDH-228ENST00000641847 EP400Q96L91 3159 aa13.91□□□□□ -0.18
PHGDH-228ENST00000641847 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.19
PHGDH-228ENST00000641847 NOS1P29475 1434 aa13.9□□□□□ -0.19
PHGDH-228ENST00000641847 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.19
PHGDH-228ENST00000641847 PIK3R4Q99570 1358 aa13.89□□□□□ -0.19
PHGDH-228ENST00000641847 HRCP23327 699 aa13.89□□□□□ -0.19
PHGDH-228ENST00000641847 CCDC125Q86Z20 511 aa13.89□□□□□ -0.19
PHGDH-228ENST00000641847 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
PHGDH-228ENST00000641847 IQGAP3Q86VI3 1631 aa13.87□□□□□ -0.19
PHGDH-228ENST00000641847 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
PHGDH-228ENST00000641847 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
PHGDH-228ENST00000641847 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
PHGDH-228ENST00000641847 DCCP43146 1447 aa13.85□□□□□ -0.19
PHGDH-228ENST00000641847 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
PHGDH-228ENST00000641847 TRPC5Q9UL62 973 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-228ENST00000641847 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
PHGDH-228ENST00000641847 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-228ENST00000641847 USP21Q9UK80 565 aa13.84□□□□□ -0.19
PHGDH-228ENST00000641847 RPRD2Q5VT52 1461 aaKnown RBP13.84□□□□□ -0.19
PHGDH-228ENST00000641847 NUP155O75694 1391 aa13.83□□□□□ -0.19
PHGDH-228ENST00000641847 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
PHGDH-228ENST00000641847 ASXL1Q8IXJ9 1541 aa13.83□□□□□ -0.2
PHGDH-228ENST00000641847 DIP2AQ14689 1571 aa13.83□□□□□ -0.2
PHGDH-228ENST00000641847 PNPLA6Q8IY17 1366 aa13.81□□□□□ -0.2
PHGDH-228ENST00000641847 ADAMTS13Q76LX8 1427 aa13.8□□□□□ -0.2
PHGDH-228ENST00000641847 TRPM2O94759 1503 aa13.79□□□□□ -0.2
PHGDH-228ENST00000641847 MST1RQ04912 1400 aa13.77□□□□□ -0.21
PHGDH-228ENST00000641847 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-228ENST00000641847 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-228ENST00000641847 MPHOSPH9Q99550 1183 aa13.77□□□□□ -0.21
PHGDH-228ENST00000641847 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
PHGDH-228ENST00000641847 E9PCH4 1651 aa13.76□□□□□ -0.21
PHGDH-228ENST00000641847 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
PHGDH-228ENST00000641847 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
PHGDH-228ENST00000641847 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
PHGDH-228ENST00000641847 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
PHGDH-228ENST00000641847 PTCH1Q13635 1447 aa13.74□□□□□ -0.21
PHGDH-228ENST00000641847 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
PHGDH-228ENST00000641847 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
PHGDH-228ENST00000641847 ATRNO75882 1429 aa13.72□□□□□ -0.21
PHGDH-228ENST00000641847 SPHKAPQ2M3C7 1700 aa13.71□□□□□ -0.21
PHGDH-228ENST00000641847 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.22
PHGDH-228ENST00000641847 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-228ENST00000641847 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms