RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 E9PCH4 1651 aa20.58■□□□□ 0.89
PAX6-277ENST00000640735 DCAF11Q8TEB1 546 aa20.58■□□□□ 0.88
PAX6-277ENST00000640735 LAMC1P11047 1609 aa20.58■□□□□ 0.88
PAX6-277ENST00000640735 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
PAX6-277ENST00000640735 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
PAX6-277ENST00000640735 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
PAX6-277ENST00000640735 KIF3BO15066 747 aa20.57■□□□□ 0.88
PAX6-277ENST00000640735 NBR1Q14596 966 aa20.56■□□□□ 0.88
PAX6-277ENST00000640735 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
PAX6-277ENST00000640735 RNF17Q9BXT8 1623 aaKnown RBP20.54■□□□□ 0.88
PAX6-277ENST00000640735 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
PAX6-277ENST00000640735 MLECQ14165 292 aa20.53■□□□□ 0.88
PAX6-277ENST00000640735 PAXIP1Q6ZW49 1069 aaPredicted RBP20.52■□□□□ 0.88
PAX6-277ENST00000640735 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
PAX6-277ENST00000640735 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.87
PAX6-277ENST00000640735 GGT6Q6P531 493 aa20.51■□□□□ 0.87
PAX6-277ENST00000640735 PNISRQ8TF01 805 aaKnown RBP20.5■□□□□ 0.87
PAX6-277ENST00000640735 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
PAX6-277ENST00000640735 RBM19Q9Y4C8 960 aaKnown RBP20.5■□□□□ 0.87
PAX6-277ENST00000640735 PRDM15P57071 1507 aaPredicted RBP20.49■□□□□ 0.87
PAX6-277ENST00000640735 RALBP1Q15311 655 aa20.49■□□□□ 0.87
PAX6-277ENST00000640735 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
PAX6-277ENST00000640735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.48■□□□□ 0.87
PAX6-277ENST00000640735 BRD4O60885 1362 aaPredicted RBP20.48■□□□□ 0.87
PAX6-277ENST00000640735 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
PAX6-277ENST00000640735 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
PAX6-277ENST00000640735 IRX6P78412 446 aaPredicted RBP20.46■□□□□ 0.87
PAX6-277ENST00000640735 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
PAX6-277ENST00000640735 MYBBP1AQ9BQG0 1328 aaKnown RBP20.45■□□□□ 0.86
PAX6-277ENST00000640735 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.44■□□□□ 0.86
PAX6-277ENST00000640735 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
PAX6-277ENST00000640735 ADAMTSL3P82987 1691 aa20.44■□□□□ 0.86
PAX6-277ENST00000640735 KANK1Q14678 1352 aa20.43■□□□□ 0.86
PAX6-277ENST00000640735 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
PAX6-277ENST00000640735 MADDQ8WXG6 1647 aa20.43■□□□□ 0.86
PAX6-277ENST00000640735 VWDEQ8N2E2 1590 aa20.42■□□□□ 0.86
PAX6-277ENST00000640735 CEP152O94986 1710 aa20.42■□□□□ 0.86
PAX6-277ENST00000640735 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
PAX6-277ENST00000640735 ZC3H13Q5T200 1668 aaKnown RBP20.42■□□□□ 0.86
PAX6-277ENST00000640735 TMC1Q8TDI8 760 aa20.41■□□□□ 0.86
PAX6-277ENST00000640735 ABCC3O15438 1527 aa20.41■□□□□ 0.86
PAX6-277ENST00000640735 NBPF1Q3BBV0 1214 aa20.41■□□□□ 0.86
PAX6-277ENST00000640735 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
PAX6-277ENST00000640735 PARD3Q8TEW0 1356 aa20.4■□□□□ 0.86
PAX6-277ENST00000640735 ESF1Q9H501 851 aaKnown RBP20.4■□□□□ 0.86
PAX6-277ENST00000640735 TESK2Q96S53 571 aa20.39■□□□□ 0.85
PAX6-277ENST00000640735 RIMS1Q86UR5 1692 aaKnown RBP20.38■□□□□ 0.85
PAX6-277ENST00000640735 PER1O15534 1290 aaPredicted RBP20.38■□□□□ 0.85
PAX6-277ENST00000640735 RGL3Q3MIN7 710 aa20.38■□□□□ 0.85
PAX6-277ENST00000640735 CAMSAP1Q5T5Y3 1602 aa20.36■□□□□ 0.85
PAX6-277ENST00000640735 LMTK2Q8IWU2 1503 aa20.36■□□□□ 0.85
PAX6-277ENST00000640735 ANP32EQ9BTT0 268 aa20.36■□□□□ 0.85
PAX6-277ENST00000640735 PTPRTO14522 1441 aa20.35■□□□□ 0.85
PAX6-277ENST00000640735 MROH2AA6NES4 1674 aa20.35■□□□□ 0.85
PAX6-277ENST00000640735 TET3O43151 1660 aa20.35■□□□□ 0.85
PAX6-277ENST00000640735 INSRP06213 1382 aa20.35■□□□□ 0.85
PAX6-277ENST00000640735 TRPM2O94759 1503 aa20.34■□□□□ 0.85
PAX6-277ENST00000640735 NLRP13Q86W25 1043 aa20.34■□□□□ 0.85
PAX6-277ENST00000640735 STAC3Q96MF2 364 aa20.33■□□□□ 0.85
PAX6-277ENST00000640735 EFCAB6Q5THR3 1501 aa20.33■□□□□ 0.84
PAX6-277ENST00000640735 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
PAX6-277ENST00000640735 DISP3Q9P2K9 1392 aa20.32■□□□□ 0.84
PAX6-277ENST00000640735 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
PAX6-277ENST00000640735 C3P01024 1663 aa20.3■□□□□ 0.84
PAX6-277ENST00000640735 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
PAX6-277ENST00000640735 BBXQ8WY36 941 aaPredicted RBP20.3■□□□□ 0.84
PAX6-277ENST00000640735 ZMYM3Q14202 1370 aa20.3■□□□□ 0.84
PAX6-277ENST00000640735 NEURL4Q96JN8 1562 aa20.3■□□□□ 0.84
PAX6-277ENST00000640735 SPHKAPQ2M3C7 1700 aa20.29■□□□□ 0.84
PAX6-277ENST00000640735 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
PAX6-277ENST00000640735 TMF1P82094 1093 aa20.28■□□□□ 0.84
PAX6-277ENST00000640735 PTPRMP28827 1452 aa20.27■□□□□ 0.84
PAX6-277ENST00000640735 NPATQ14207 1427 aa20.27■□□□□ 0.84
PAX6-277ENST00000640735 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
PAX6-277ENST00000640735 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
PAX6-277ENST00000640735 CEBPAP49715 358 aaPredicted RBP20.26■□□□□ 0.83
PAX6-277ENST00000640735 CLTCL1P53675 1640 aa20.24■□□□□ 0.83
PAX6-277ENST00000640735 PDE3BQ13370 1112 aa20.23■□□□□ 0.83
PAX6-277ENST00000640735 PREX1Q8TCU6 1659 aa20.23■□□□□ 0.83
PAX6-277ENST00000640735 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
PAX6-277ENST00000640735 PANK3Q9H999 370 aa20.22■□□□□ 0.83
PAX6-277ENST00000640735 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
PAX6-277ENST00000640735 ERVK-7P63135 1459 aa20.21■□□□□ 0.83
PAX6-277ENST00000640735 BLMP54132 1417 aaPredicted RBP20.21■□□□□ 0.83
PAX6-277ENST00000640735 FBXO31Q5XUX0 539 aaPredicted RBP20.21■□□□□ 0.83
PAX6-277ENST00000640735 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
PAX6-277ENST00000640735 SPATA31D1Q6ZQQ2 1576 aa20.2■□□□□ 0.82
PAX6-277ENST00000640735 PLEKHG5O94827 1062 aa20.2■□□□□ 0.82
PAX6-277ENST00000640735 NOS1P29475 1434 aa20.17■□□□□ 0.82
PAX6-277ENST00000640735 MSH5O43196 834 aa20.17■□□□□ 0.82
PAX6-277ENST00000640735 SYNMO15061 1565 aa20.16■□□□□ 0.82
PAX6-277ENST00000640735 CDCA8Q53HL2 280 aa20.15■□□□□ 0.82
PAX6-277ENST00000640735 TNRQ92752 1358 aa20.15■□□□□ 0.82
PAX6-277ENST00000640735 MYOM2P54296 1465 aa20.14■□□□□ 0.81
PAX6-277ENST00000640735 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
PAX6-277ENST00000640735 RRP1P56182 461 aaKnown RBP20.12■□□□□ 0.81
PAX6-277ENST00000640735 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
PAX6-277ENST00000640735 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
PAX6-277ENST00000640735 MYO3AQ8NEV4 1616 aa20.11■□□□□ 0.81
PAX6-277ENST00000640735 CCDC136Q96JN2 1154 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms