RNA–Protein interactions for RNA: ENST00000640683.1

PFKFB3-219, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 5 BASIC

Gene PFKFB3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-219ENST00000640683 GSE1Q14687 1217 aa25.77■■□□□ 1.72
PFKFB3-219ENST00000640683 TTC37Q6PGP7 1564 aa25.77■■□□□ 1.72
PFKFB3-219ENST00000640683 ANO8Q9HCE9 1232 aaPredicted RBP25.76■■□□□ 1.71
PFKFB3-219ENST00000640683 IQGAP1P46940 1657 aa25.75■■□□□ 1.71
PFKFB3-219ENST00000640683 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
PFKFB3-219ENST00000640683 DUOX2Q9NRD8 1548 aa25.74■■□□□ 1.71
PFKFB3-219ENST00000640683 SYNMO15061 1565 aa25.73■■□□□ 1.71
PFKFB3-219ENST00000640683 MADDQ8WXG6 1647 aa25.72■■□□□ 1.71
PFKFB3-219ENST00000640683 SLFN5Q08AF3 891 aa25.71■■□□□ 1.71
PFKFB3-219ENST00000640683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.71■■□□□ 1.71
PFKFB3-219ENST00000640683 ASXL1Q8IXJ9 1541 aa25.7■■□□□ 1.71
PFKFB3-219ENST00000640683 PIK3C2GO75747 1445 aa25.7■■□□□ 1.7
PFKFB3-219ENST00000640683 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
PFKFB3-219ENST00000640683 RGS3P49796 1198 aa25.66■■□□□ 1.7
PFKFB3-219ENST00000640683 TRMT2AQ8IZ69 625 aaKnown RBP25.66■■□□□ 1.7
PFKFB3-219ENST00000640683 EIF3AQ14152 1382 aaKnown RBP25.66■■□□□ 1.7
PFKFB3-219ENST00000640683 BRPF3Q9ULD4 1205 aa25.65■■□□□ 1.7
PFKFB3-219ENST00000640683 FRAT1Q92837 279 aaPredicted RBP25.65■■□□□ 1.7
PFKFB3-219ENST00000640683 ABCC2Q92887 1545 aa25.64■■□□□ 1.69
PFKFB3-219ENST00000640683 NKTRP30414 1462 aaKnown RBP25.64■■□□□ 1.69
PFKFB3-219ENST00000640683 SCAF11Q99590 1463 aaKnown RBP25.64■■□□□ 1.69
PFKFB3-219ENST00000640683 CCDC146Q8IYE0 955 aa25.63■■□□□ 1.69
PFKFB3-219ENST00000640683 MYOM1P52179 1685 aa25.63■■□□□ 1.69
PFKFB3-219ENST00000640683 NPC1L1Q9UHC9 1359 aa25.62■■□□□ 1.69
PFKFB3-219ENST00000640683 SPHKAPQ2M3C7 1700 aa25.62■■□□□ 1.69
PFKFB3-219ENST00000640683 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
PFKFB3-219ENST00000640683 SPINK5Q9NQ38 1064 aaPredicted RBP25.59■■□□□ 1.69
PFKFB3-219ENST00000640683 VIRMAQ69YN4 1812 aaKnown RBP25.58■■□□□ 1.69
PFKFB3-219ENST00000640683 APAF1O14727 1248 aa25.58■■□□□ 1.68
PFKFB3-219ENST00000640683 BCAR3O75815 825 aa25.57■■□□□ 1.68
PFKFB3-219ENST00000640683 CEP152O94986 1710 aa25.57■■□□□ 1.68
PFKFB3-219ENST00000640683 TRPM2O94759 1503 aa25.56■■□□□ 1.68
PFKFB3-219ENST00000640683 E9PSI1 815 aa25.56■■□□□ 1.68
PFKFB3-219ENST00000640683 FRAT2O75474 233 aaPredicted RBP25.56■■□□□ 1.68
PFKFB3-219ENST00000640683 KDM5AP29375 1690 aaKnown RBP25.55■■□□□ 1.68
PFKFB3-219ENST00000640683 STAC3Q96MF2 364 aa25.53■■□□□ 1.68
PFKFB3-219ENST00000640683 PRKCSHP14314 528 aaPredicted RBP25.52■■□□□ 1.68
PFKFB3-219ENST00000640683 IGHDP01880 384 aa25.51■■□□□ 1.67
PFKFB3-219ENST00000640683 CLTCL1P53675 1640 aa25.51■■□□□ 1.67
PFKFB3-219ENST00000640683 CGNL1Q0VF96 1302 aa25.5■■□□□ 1.67
PFKFB3-219ENST00000640683 NGEFQ8N5V2 710 aa25.48■■□□□ 1.67
PFKFB3-219ENST00000640683 PTPRTO14522 1441 aa25.48■■□□□ 1.67
PFKFB3-219ENST00000640683 PDE3AQ14432 1141 aa25.48■■□□□ 1.67
PFKFB3-219ENST00000640683 USP19O94966 1318 aa25.48■■□□□ 1.67
PFKFB3-219ENST00000640683 PLCH2O75038 1416 aa25.48■■□□□ 1.67
PFKFB3-219ENST00000640683 ABCC1P33527 1531 aa25.47■■□□□ 1.67
PFKFB3-219ENST00000640683 DMRT2Q9Y5R5 561 aa25.47■■□□□ 1.67
PFKFB3-219ENST00000640683 NINLQ9Y2I6 1382 aa25.47■■□□□ 1.67
PFKFB3-219ENST00000640683 KIAA1210Q9ULL0 1709 aa25.47■■□□□ 1.67
PFKFB3-219ENST00000640683 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
PFKFB3-219ENST00000640683 EFCAB2Q5VUJ9 269 aa25.45■■□□□ 1.66
PFKFB3-219ENST00000640683 MAPK8IP3Q9UPT6 1336 aa25.45■■□□□ 1.66
PFKFB3-219ENST00000640683 CENPJQ9HC77 1338 aaPredicted RBP25.45■■□□□ 1.66
PFKFB3-219ENST00000640683 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.45■■□□□ 1.66
PFKFB3-219ENST00000640683 CLUAP1Q96AJ1 413 aa25.44■■□□□ 1.66
PFKFB3-219ENST00000640683 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
PFKFB3-219ENST00000640683 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
PFKFB3-219ENST00000640683 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
PFKFB3-219ENST00000640683 PANK1Q8TE04 598 aa25.4■■□□□ 1.66
PFKFB3-219ENST00000640683 COG6Q9Y2V7 657 aa25.4■■□□□ 1.66
PFKFB3-219ENST00000640683 SEC24BO95487 1268 aa25.4■■□□□ 1.66
PFKFB3-219ENST00000640683 CARD14Q9BXL6 1004 aa25.4■■□□□ 1.66
PFKFB3-219ENST00000640683 TET3O43151 1660 aa25.39■■□□□ 1.66
PFKFB3-219ENST00000640683 SLC24A1O60721 1099 aa25.39■■□□□ 1.66
PFKFB3-219ENST00000640683 CHD1O14646 1710 aa25.39■■□□□ 1.65
PFKFB3-219ENST00000640683 BECN1Q14457 450 aa25.38■■□□□ 1.65
PFKFB3-219ENST00000640683 SPAG9O60271 1321 aaKnown RBP25.38■■□□□ 1.65
PFKFB3-219ENST00000640683 DEPDC5O75140 1603 aa25.38■■□□□ 1.65
PFKFB3-219ENST00000640683 WWC1Q8IX03 1113 aa25.38■■□□□ 1.65
PFKFB3-219ENST00000640683 POLR3AO14802 1390 aaPredicted RBP25.36■■□□□ 1.65
PFKFB3-219ENST00000640683 NLRP1Q9C000 1473 aa25.36■■□□□ 1.65
PFKFB3-219ENST00000640683 ZFYVE16Q7Z3T8 1539 aa25.35■■□□□ 1.65
PFKFB3-219ENST00000640683 RTEL1-TNFRSF6BF6WH68 1400 aa25.35■■□□□ 1.65
PFKFB3-219ENST00000640683 ABCA6Q8N139 1617 aa25.35■■□□□ 1.65
PFKFB3-219ENST00000640683 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
PFKFB3-219ENST00000640683 NEURL4Q96JN8 1562 aa25.34■■□□□ 1.65
PFKFB3-219ENST00000640683 MAP3K4Q9Y6R4 1608 aa25.34■■□□□ 1.65
PFKFB3-219ENST00000640683 CFAP70Q5T0N1 1121 aa25.34■■□□□ 1.65
PFKFB3-219ENST00000640683 ZCCHC11Q5TAX3 1644 aaKnown RBP25.32■■□□□ 1.64
PFKFB3-219ENST00000640683 MYOM2P54296 1465 aa25.32■■□□□ 1.64
PFKFB3-219ENST00000640683 PMFBP1Q8TBY8 1022 aa25.31■■□□□ 1.64
PFKFB3-219ENST00000640683 SHPRHQ149N8 1683 aa25.3■■□□□ 1.64
PFKFB3-219ENST00000640683 KANK1Q14678 1352 aa25.3■■□□□ 1.64
PFKFB3-219ENST00000640683 AAMPQ13685 434 aa25.3■■□□□ 1.64
PFKFB3-219ENST00000640683 POGKQ9P215 609 aa25.3■■□□□ 1.64
PFKFB3-219ENST00000640683 RARSP54136 660 aaKnown RBP25.29■■□□□ 1.64
PFKFB3-219ENST00000640683 FAM43AQ8N2R8 423 aa25.29■■□□□ 1.64
PFKFB3-219ENST00000640683 AFAP1Q8N556 730 aa25.29■■□□□ 1.64
PFKFB3-219ENST00000640683 VWDEQ8N2E2 1590 aa25.29■■□□□ 1.64
PFKFB3-219ENST00000640683 SLKQ9H2G2 1235 aaPredicted RBP25.29■■□□□ 1.64
PFKFB3-219ENST00000640683 ZMYM3Q14202 1370 aa25.27■■□□□ 1.64
PFKFB3-219ENST00000640683 ADGRF5Q8IZF2 1346 aa25.27■■□□□ 1.64
PFKFB3-219ENST00000640683 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
PFKFB3-219ENST00000640683 UPF2Q9HAU5 1272 aaKnown RBP25.26■■□□□ 1.63
PFKFB3-219ENST00000640683 RUNDC1Q96C34 613 aa25.26■■□□□ 1.63
PFKFB3-219ENST00000640683 NEUROD2Q15784 382 aa25.25■■□□□ 1.63
PFKFB3-219ENST00000640683 PCDHB15Q9Y5E8 787 aa25.25■■□□□ 1.63
PFKFB3-219ENST00000640683 IQSEC2Q5JU85 1478 aa25.25■■□□□ 1.63
PFKFB3-219ENST00000640683 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
PFKFB3-219ENST00000640683 UGGT1Q9NYU2 1555 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms