RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
SLC35A3-220ENST00000640360 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
SLC35A3-220ENST00000640360 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 UHRF1BP1Q6BDS2 1440 aa13.74□□□□□ -0.21
SLC35A3-220ENST00000640360 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
SLC35A3-220ENST00000640360 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
SLC35A3-220ENST00000640360 KDM5DQ9BY66 1539 aa13.73□□□□□ -0.21
SLC35A3-220ENST00000640360 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
SLC35A3-220ENST00000640360 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
SLC35A3-220ENST00000640360 GGNBP2Q9H3C7 697 aa13.72□□□□□ -0.21
SLC35A3-220ENST00000640360 MTHFSP49914 203 aa13.71□□□□□ -0.21
SLC35A3-220ENST00000640360 GZF1Q9H116 711 aaPredicted RBP13.71□□□□□ -0.21
SLC35A3-220ENST00000640360 SLFN5Q08AF3 891 aa13.71□□□□□ -0.21
SLC35A3-220ENST00000640360 MORC1Q86VD1 984 aa13.71□□□□□ -0.22
SLC35A3-220ENST00000640360 ABCA8O94911 1581 aa13.7□□□□□ -0.22
SLC35A3-220ENST00000640360 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
SLC35A3-220ENST00000640360 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
SLC35A3-220ENST00000640360 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
SLC35A3-220ENST00000640360 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
SLC35A3-220ENST00000640360 NUP160Q12769 1436 aa13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 CDC42BPBQ9Y5S2 1711 aa13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 PCDHB15Q9Y5E8 787 aa13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 THUMPD2Q9BTF0 503 aaKnown RBP13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 SOX12O15370 315 aa13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
SLC35A3-220ENST00000640360 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
SLC35A3-220ENST00000640360 ITSN2Q9NZM3 1697 aa13.68□□□□□ -0.22
SLC35A3-220ENST00000640360 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 MLECQ14165 292 aa13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
SLC35A3-220ENST00000640360 WDR7Q9Y4E6 1490 aa13.66□□□□□ -0.22
SLC35A3-220ENST00000640360 EIF5BO60841 1220 aaKnown RBP13.66□□□□□ -0.22
SLC35A3-220ENST00000640360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLC35A3-220ENST00000640360 MINK1Q8N4C8 1332 aaPredicted RBP13.66□□□□□ -0.22
SLC35A3-220ENST00000640360 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
SLC35A3-220ENST00000640360 POGKQ9P215 609 aa13.65□□□□□ -0.22
SLC35A3-220ENST00000640360 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
SLC35A3-220ENST00000640360 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
SLC35A3-220ENST00000640360 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
SLC35A3-220ENST00000640360 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
SLC35A3-220ENST00000640360 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
SLC35A3-220ENST00000640360 TRPM1Q7Z4N2 1603 aa13.63□□□□□ -0.23
SLC35A3-220ENST00000640360 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
SLC35A3-220ENST00000640360 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
SLC35A3-220ENST00000640360 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
SLC35A3-220ENST00000640360 HMOX1P09601 288 aa13.61□□□□□ -0.23
SLC35A3-220ENST00000640360 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
SLC35A3-220ENST00000640360 APBB1O00213 710 aa13.61□□□□□ -0.23
SLC35A3-220ENST00000640360 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
SLC35A3-220ENST00000640360 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
SLC35A3-220ENST00000640360 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
SLC35A3-220ENST00000640360 FBXO31Q5XUX0 539 aaPredicted RBP13.59□□□□□ -0.23
SLC35A3-220ENST00000640360 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.23
SLC35A3-220ENST00000640360 WASHC2CQ9Y4E1 1318 aa13.58□□□□□ -0.24
SLC35A3-220ENST00000640360 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
SLC35A3-220ENST00000640360 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
SLC35A3-220ENST00000640360 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
SLC35A3-220ENST00000640360 BLMP54132 1417 aaPredicted RBP13.58□□□□□ -0.24
SLC35A3-220ENST00000640360 GSE1Q14687 1217 aa13.57□□□□□ -0.24
SLC35A3-220ENST00000640360 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
SLC35A3-220ENST00000640360 NOS1P29475 1434 aa13.57□□□□□ -0.24
SLC35A3-220ENST00000640360 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
SLC35A3-220ENST00000640360 RARSP54136 660 aaKnown RBP13.57□□□□□ -0.24
SLC35A3-220ENST00000640360 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
SLC35A3-220ENST00000640360 USP19O94966 1318 aa13.56□□□□□ -0.24
SLC35A3-220ENST00000640360 MS4A1P11836 297 aa13.56□□□□□ -0.24
SLC35A3-220ENST00000640360 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
SLC35A3-220ENST00000640360 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 WAPLQ7Z5K2 1190 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 ATP10AO60312 1499 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
SLC35A3-220ENST00000640360 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
SLC35A3-220ENST00000640360 E9PSI1 815 aa13.54□□□□□ -0.24
SLC35A3-220ENST00000640360 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
SLC35A3-220ENST00000640360 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
SLC35A3-220ENST00000640360 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
SLC35A3-220ENST00000640360 ZMYM4Q5VZL5 1548 aa13.53□□□□□ -0.24
SLC35A3-220ENST00000640360 DTNBO60941 627 aa13.53□□□□□ -0.24
SLC35A3-220ENST00000640360 E9PCH4 1651 aa13.53□□□□□ -0.24
SLC35A3-220ENST00000640360 PRDM15P57071 1507 aaPredicted RBP13.52□□□□□ -0.24
SLC35A3-220ENST00000640360 CHD1O14646 1710 aa13.52□□□□□ -0.24
SLC35A3-220ENST00000640360 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
SLC35A3-220ENST00000640360 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
SLC35A3-220ENST00000640360 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
SLC35A3-220ENST00000640360 PLCH2O75038 1416 aa13.51□□□□□ -0.25
SLC35A3-220ENST00000640360 IDI1Q13907 227 aa13.5□□□□□ -0.25
SLC35A3-220ENST00000640360 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms