RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.37	□□□□□ -0.59
CNTN2-231	ENST00000640352	NCKAP5L	Q9HCH0	1330 aa		11.36	□□□□□ -0.59
CNTN2-231	ENST00000640352	NBPF1	Q3BBV0	1214 aa		11.36	□□□□□ -0.59
CNTN2-231	ENST00000640352	ARHGEF12	Q9NZN5	1544 aa		11.36	□□□□□ -0.59
CNTN2-231	ENST00000640352	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.36	□□□□□ -0.59
CNTN2-231	ENST00000640352	A2M	P01023	1474 aa		11.36	□□□□□ -0.59
CNTN2-231	ENST00000640352	USP47	Q96K76	1375 aa		11.35	□□□□□ -0.59
CNTN2-231	ENST00000640352	HSP90AA1	P07900	732 aa	Known RBP	11.35	□□□□□ -0.59
CNTN2-231	ENST00000640352	PNISR	Q8TF01	805 aa	Known RBP	11.35	□□□□□ -0.59
CNTN2-231	ENST00000640352	RGS3	P49796	1198 aa		11.34	□□□□□ -0.59
CNTN2-231	ENST00000640352	ANKLE2	Q86XL3	938 aa		11.34	□□□□□ -0.59
CNTN2-231	ENST00000640352	ZMYM3	Q14202	1370 aa		11.34	□□□□□ -0.59
CNTN2-231	ENST00000640352	DIP2B	Q9P265	1576 aa		11.33	□□□□□ -0.6
CNTN2-231	ENST00000640352	ANKRD30B	Q9BXX2	1392 aa		11.33	□□□□□ -0.6
CNTN2-231	ENST00000640352	RCAN3	Q9UKA8	241 aa		11.33	□□□□□ -0.6
CNTN2-231	ENST00000640352	VGF	O15240	615 aa	Predicted RBP	11.33	□□□□□ -0.6
CNTN2-231	ENST00000640352	XPC	Q01831	940 aa	Predicted RBP	11.33	□□□□□ -0.6
CNTN2-231	ENST00000640352	PROSER2	Q86WR7	435 aa	Predicted RBP	11.33	□□□□□ -0.6
CNTN2-231	ENST00000640352	PDE4A	P27815	886 aa		11.32	□□□□□ -0.6
CNTN2-231	ENST00000640352	RRP1	P56182	461 aa	Known RBP	11.31	□□□□□ -0.6
CNTN2-231	ENST00000640352	WAPL	Q7Z5K2	1190 aa		11.31	□□□□□ -0.6
CNTN2-231	ENST00000640352	ZMYND15	Q9H091	742 aa		11.31	□□□□□ -0.6
CNTN2-231	ENST00000640352	TCERG1	O14776	1098 aa	Known RBP	11.31	□□□□□ -0.6
CNTN2-231	ENST00000640352	NUTM2G	Q5VZR2	741 aa		11.31	□□□□□ -0.6
CNTN2-231	ENST00000640352	KNSTRN	Q9Y448	316 aa		11.31	□□□□□ -0.6
CNTN2-231	ENST00000640352	ROCK2	O75116	1388 aa	Known RBP	11.3	□□□□□ -0.6
CNTN2-231	ENST00000640352	SMG6	Q86US8	1419 aa	Known RBP	11.3	□□□□□ -0.6
CNTN2-231	ENST00000640352	ANP32B	Q92688	251 aa	Known RBP	11.3	□□□□□ -0.6
CNTN2-231	ENST00000640352	ARID3A	Q99856	593 aa		11.3	□□□□□ -0.6
CNTN2-231	ENST00000640352	BECN1	Q14457	450 aa		11.29	□□□□□ -0.6
CNTN2-231	ENST00000640352	RALBP1	Q15311	655 aa		11.29	□□□□□ -0.6
CNTN2-231	ENST00000640352	KIAA1107	Q9UPP5	1409 aa		11.29	□□□□□ -0.6
CNTN2-231	ENST00000640352	ADGRF5	Q8IZF2	1346 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	NEO1	Q92859	1461 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	USP35	Q9P2H5	1018 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	MBD5	Q9P267	1494 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	PMFBP1	Q8TBY8	1022 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	SLC52A1	Q9NWF4	448 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	RSPH6A	Q9H0K4	717 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	ATP10A	O60312	1499 aa		11.28	□□□□□ -0.6
CNTN2-231	ENST00000640352	CDCA8	Q53HL2	280 aa		11.27	□□□□□ -0.6
CNTN2-231	ENST00000640352	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.27	□□□□□ -0.6
CNTN2-231	ENST00000640352	CRBN	Q96SW2	442 aa		11.27	□□□□□ -0.6
CNTN2-231	ENST00000640352	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.27	□□□□□ -0.61
CNTN2-231	ENST00000640352	KDM4F	A0A1W2PPD8	638 aa		11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	NCL	P19338	710 aa	Known RBP	11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	KTN1	Q86UP2	1357 aa	Known RBP	11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	TNR	Q92752	1358 aa		11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	TMF1	P82094	1093 aa		11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	C20orf194	Q5TEA3	1177 aa		11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	NGDN	Q8NEJ9	315 aa	Known RBP	11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	RPRD2	Q5VT52	1461 aa	Known RBP	11.26	□□□□□ -0.61
CNTN2-231	ENST00000640352	TRIM44	Q96DX7	344 aa	Predicted RBP	11.25	□□□□□ -0.61
CNTN2-231	ENST00000640352	PRAM1	Q96QH2	718 aa		11.25	□□□□□ -0.61
CNTN2-231	ENST00000640352	GSE1	Q14687	1217 aa		11.25	□□□□□ -0.61
CNTN2-231	ENST00000640352	LRRIQ1	Q96JM4	1722 aa		11.25	□□□□□ -0.61
CNTN2-231	ENST00000640352	SAMD9L	Q8IVG5	1584 aa		11.25	□□□□□ -0.61
CNTN2-231	ENST00000640352	CABP2	Q9NPB3	220 aa		11.25	□□□□□ -0.61
CNTN2-231	ENST00000640352	ERBIN	Q96RT1	1412 aa		11.24	□□□□□ -0.61
CNTN2-231	ENST00000640352	BRPF3	Q9ULD4	1205 aa		11.24	□□□□□ -0.61
CNTN2-231	ENST00000640352	NLRP13	Q86W25	1043 aa		11.24	□□□□□ -0.61
CNTN2-231	ENST00000640352	PPP6R1	Q9UPN7	881 aa		11.24	□□□□□ -0.61
CNTN2-231	ENST00000640352	ATP7A	Q04656	1500 aa		11.24	□□□□□ -0.61
CNTN2-231	ENST00000640352	LTK	P29376	864 aa		11.24	□□□□□ -0.61
CNTN2-231	ENST00000640352	SPATA31E1	Q6ZUB1	1445 aa		11.23	□□□□□ -0.61
CNTN2-231	ENST00000640352	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.23	□□□□□ -0.61
CNTN2-231	ENST00000640352	BACH2	Q9BYV9	841 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	AMOTL2	Q9Y2J4	779 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	ZFYVE16	Q7Z3T8	1539 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	ROCK1	Q13464	1354 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	PDE3B	Q13370	1112 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	MYO5C	Q9NQX4	1742 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	ESCO1	Q5FWF5	840 aa		11.22	□□□□□ -0.61
CNTN2-231	ENST00000640352	ATF3	P18847	181 aa		11.21	□□□□□ -0.61
CNTN2-231	ENST00000640352	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.21	□□□□□ -0.61
CNTN2-231	ENST00000640352	NUTM2E	B1AL46	878 aa	Predicted RBP	11.21	□□□□□ -0.61
CNTN2-231	ENST00000640352	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.21	□□□□□ -0.61
CNTN2-231	ENST00000640352	ABCA9	Q8IUA7	1624 aa		11.21	□□□□□ -0.62
CNTN2-231	ENST00000640352	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.21	□□□□□ -0.62
CNTN2-231	ENST00000640352	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
CNTN2-231	ENST00000640352	SLK	Q9H2G2	1235 aa	Predicted RBP	11.2	□□□□□ -0.62
CNTN2-231	ENST00000640352	LTV1	Q96GA3	475 aa	Predicted RBP	11.2	□□□□□ -0.62
CNTN2-231	ENST00000640352	PANK3	Q9H999	370 aa		11.2	□□□□□ -0.62
CNTN2-231	ENST00000640352	CCDC9	Q9Y3X0	531 aa	Known RBP	11.2	□□□□□ -0.62
CNTN2-231	ENST00000640352	CCDC146	Q8IYE0	955 aa		11.19	□□□□□ -0.62
CNTN2-231	ENST00000640352	RNF123	Q5XPI4	1314 aa		11.19	□□□□□ -0.62
CNTN2-231	ENST00000640352	GLI2	P10070	1586 aa		11.19	□□□□□ -0.62
CNTN2-231	ENST00000640352	UBAP1L	F5GYI3	381 aa		11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	PNN	Q9H307	717 aa	Known RBP	11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	KIF13A	Q9H1H9	1805 aa		11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	FOXO3	O43524	673 aa		11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	RBM10	P98175	930 aa	Known RBP	11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	L1TD1	Q5T7N2	865 aa	Known RBP	11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	KLHL34	Q8N239	644 aa		11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	SPRYD3	Q8NCJ5	442 aa		11.18	□□□□□ -0.62
CNTN2-231	ENST00000640352	ITSN2	Q9NZM3	1697 aa		11.17	□□□□□ -0.62
CNTN2-231	ENST00000640352	ABCC1	P33527	1531 aa		11.17	□□□□□ -0.62
CNTN2-231	ENST00000640352	KCNA6	P17658	529 aa		11.17	□□□□□ -0.62
CNTN2-231	ENST00000640352	GZF1	Q9H116	711 aa	Predicted RBP	11.17	□□□□□ -0.62
CNTN2-231	ENST00000640352	NOS1	P29475	1434 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms