RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.09	□□□□□ -0.79
HNRNPU-223	ENST00000640001	MAPK8IP3	Q9UPT6	1336 aa		10.09	□□□□□ -0.79
HNRNPU-223	ENST00000640001	SLC12A5	Q9H2X9	1139 aa		10.08	□□□□□ -0.8
HNRNPU-223	ENST00000640001	CRBN	Q96SW2	442 aa		10.08	□□□□□ -0.8
HNRNPU-223	ENST00000640001	PREX2	Q70Z35	1606 aa		10.08	□□□□□ -0.8
HNRNPU-223	ENST00000640001	EVC2	Q86UK5	1308 aa		10.08	□□□□□ -0.8
HNRNPU-223	ENST00000640001	CABP2	Q9NPB3	220 aa		10.07	□□□□□ -0.8
HNRNPU-223	ENST00000640001	LAS1L	Q9Y4W2	734 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPU-223	ENST00000640001	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPU-223	ENST00000640001	CGNL1	Q0VF96	1302 aa		10.06	□□□□□ -0.8
HNRNPU-223	ENST00000640001	MYO5C	Q9NQX4	1742 aa		10.05	□□□□□ -0.8
HNRNPU-223	ENST00000640001	SCAF11	Q99590	1463 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPU-223	ENST00000640001	PER1	O15534	1290 aa	Predicted RBP	10.05	□□□□□ -0.8
HNRNPU-223	ENST00000640001	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	TERF2IP	Q9NYB0	399 aa		10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	NOP58	Q9Y2X3	529 aa	Known RBP	10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	PLA2R1	Q13018	1463 aa		10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	CROCC2	H7BZ55	1655 aa		10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	NOS1	P29475	1434 aa		10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	MAST1	Q9Y2H9	1570 aa		10.04	□□□□□ -0.8
HNRNPU-223	ENST00000640001	KDM5C	P41229	1560 aa		10.03	□□□□□ -0.8
HNRNPU-223	ENST00000640001	PARD3	Q8TEW0	1356 aa		10.03	□□□□□ -0.8
HNRNPU-223	ENST00000640001	FTSJ3	Q8IY81	847 aa	Known RBP	10.03	□□□□□ -0.8
HNRNPU-223	ENST00000640001	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.03	□□□□□ -0.8
HNRNPU-223	ENST00000640001	SOX12	O15370	315 aa		10.03	□□□□□ -0.8
HNRNPU-223	ENST00000640001	UHRF1BP1L	A0JNW5	1464 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	TCERG1	O14776	1098 aa	Known RBP	10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	BCL2L13	Q9BXK5	485 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	GGNBP2	Q9H3C7	697 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	KDM5D	Q9BY66	1539 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	MTHFS	P49914	203 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	CDC42BPB	Q9Y5S2	1711 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	ATP7A	Q04656	1500 aa		10.02	□□□□□ -0.81
HNRNPU-223	ENST00000640001	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001		E9PSI1	815 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	NUTM2F	A1L443	756 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	IDI1	Q13907	227 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	CLUAP1	Q96AJ1	413 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	GPRASP1	Q5JY77	1395 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	ZNF518A	Q6AHZ1	1483 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	ABCC1	P33527	1531 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	PLEKHG5	O94827	1062 aa		10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.01	□□□□□ -0.81
HNRNPU-223	ENST00000640001	PRAM1	Q96QH2	718 aa		10	□□□□□ -0.81
HNRNPU-223	ENST00000640001	FBXO31	Q5XUX0	539 aa	Predicted RBP	10	□□□□□ -0.81
HNRNPU-223	ENST00000640001	BCORL1	Q5H9F3	1711 aa		9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	HDGF	P51858	240 aa	Known RBP	9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	SLC52A1	Q9NWF4	448 aa		9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	RPGRIP1L	Q68CZ1	1315 aa		9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	EIF2AK4	Q9P2K8	1649 aa	Known RBP	9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	NSD3	Q9BZ95	1437 aa		9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	FANCI	Q9NVI1	1328 aa		9.99	□□□□□ -0.81
HNRNPU-223	ENST00000640001	C14orf37	Q86TY3	774 aa		9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	MYH16	Q9H6N6	1097 aa		9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	C14orf93	Q9H972	538 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	ATP10A	O60312	1499 aa		9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	RUNDC1	Q96C34	613 aa		9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	TRH	P20396	242 aa	Predicted RBP	9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	TCP11L2	Q8N4U5	519 aa		9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	UPF2	Q9HAU5	1272 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPU-223	ENST00000640001	PDE4A	P27815	886 aa		9.97	□□□□□ -0.81
HNRNPU-223	ENST00000640001	COG6	Q9Y2V7	657 aa		9.97	□□□□□ -0.81
HNRNPU-223	ENST00000640001	LRPPRC	P42704	1394 aa	Known RBP	9.97	□□□□□ -0.81
HNRNPU-223	ENST00000640001	C20orf194	Q5TEA3	1177 aa		9.96	□□□□□ -0.81
HNRNPU-223	ENST00000640001	ZBTB7C	A1YPR0	619 aa		9.96	□□□□□ -0.82
HNRNPU-223	ENST00000640001	BCAR3	O75815	825 aa		9.96	□□□□□ -0.82
HNRNPU-223	ENST00000640001	PNN	Q9H307	717 aa	Known RBP	9.96	□□□□□ -0.82
HNRNPU-223	ENST00000640001	DDRGK1	Q96HY6	314 aa		9.96	□□□□□ -0.82
HNRNPU-223	ENST00000640001	SMC4	Q9NTJ3	1288 aa		9.96	□□□□□ -0.82
HNRNPU-223	ENST00000640001	IPO9	Q96P70	1041 aa	Known RBP	9.95	□□□□□ -0.82
HNRNPU-223	ENST00000640001	CARD14	Q9BXL6	1004 aa		9.95	□□□□□ -0.82
HNRNPU-223	ENST00000640001	PLXNC1	O60486	1568 aa		9.95	□□□□□ -0.82
HNRNPU-223	ENST00000640001	UGGT1	Q9NYU2	1555 aa		9.95	□□□□□ -0.82
HNRNPU-223	ENST00000640001	SKAP1	Q86WV1	359 aa		9.95	□□□□□ -0.82
HNRNPU-223	ENST00000640001	CENPQ	Q7L2Z9	268 aa	Predicted RBP	9.94	□□□□□ -0.82
HNRNPU-223	ENST00000640001	PANK1	Q8TE04	598 aa		9.94	□□□□□ -0.82
HNRNPU-223	ENST00000640001	ZFYVE16	Q7Z3T8	1539 aa		9.94	□□□□□ -0.82
HNRNPU-223	ENST00000640001	SLFN5	Q08AF3	891 aa		9.94	□□□□□ -0.82
HNRNPU-223	ENST00000640001	CABP1	Q9NZU7	370 aa		9.94	□□□□□ -0.82
HNRNPU-223	ENST00000640001	CLASP1	Q7Z460	1538 aa		9.94	□□□□□ -0.82
HNRNPU-223	ENST00000640001	CDK19	Q9BWU1	502 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	UNC13B	O14795	1591 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	IQGAP3	Q86VI3	1631 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	DIAPH1	O60610	1272 aa	Known RBP	9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	NGEF	Q8N5V2	710 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	ASXL1	Q8IXJ9	1541 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	DUSP27	Q5VZP5	1158 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	ITPRIP	Q8IWB1	547 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	SHROOM2	Q13796	1616 aa		9.93	□□□□□ -0.82
HNRNPU-223	ENST00000640001	TXNDC2	Q86VQ3	553 aa		9.92	□□□□□ -0.82
HNRNPU-223	ENST00000640001	WAPL	Q7Z5K2	1190 aa		9.92	□□□□□ -0.82
HNRNPU-223	ENST00000640001	CFAP65	Q6ZU64	1925 aa	Known RBP	9.92	□□□□□ -0.82
HNRNPU-223	ENST00000640001	POGZ	Q7Z3K3	1410 aa		9.92	□□□□□ -0.82
HNRNPU-223	ENST00000640001	MS4A1	P11836	297 aa		9.92	□□□□□ -0.82
HNRNPU-223	ENST00000640001	MSH5	O43196	834 aa		9.91	□□□□□ -0.82
HNRNPU-223	ENST00000640001	RIPK4	P57078	832 aa		9.91	□□□□□ -0.82
HNRNPU-223	ENST00000640001	WWC1	Q8IX03	1113 aa		9.91	□□□□□ -0.82
HNRNPU-223	ENST00000640001	TRPM2	O94759	1503 aa		9.91	□□□□□ -0.82
HNRNPU-223	ENST00000640001	HMOX1	P09601	288 aa		9.91	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms