RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ADGRG1Q9Y653 693 aa13.34□□□□□ -0.27
RFC1-217ENST00000639695 TRAF7Q6Q0C0 670 aa13.32□□□□□ -0.28
RFC1-217ENST00000639695 BLOC1S3Q6QNY0 202 aa13.32□□□□□ -0.28
RFC1-217ENST00000639695 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
RFC1-217ENST00000639695 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
RFC1-217ENST00000639695 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
RFC1-217ENST00000639695 PCDHB3Q9Y5E6 796 aa13.3□□□□□ -0.28
RFC1-217ENST00000639695 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
RFC1-217ENST00000639695 TLL1O43897 1013 aa13.29□□□□□ -0.28
RFC1-217ENST00000639695 DNAJB2P25686 324 aa13.29□□□□□ -0.28
RFC1-217ENST00000639695 TMEM134Q9H6X4 195 aa13.29□□□□□ -0.28
RFC1-217ENST00000639695 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
RFC1-217ENST00000639695 SEMA3EO15041 775 aa13.26□□□□□ -0.29
RFC1-217ENST00000639695 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
RFC1-217ENST00000639695 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
RFC1-217ENST00000639695 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
RFC1-217ENST00000639695 RNF223E7ERA6 249 aa13.24□□□□□ -0.29
RFC1-217ENST00000639695 SLC10A3P09131 477 aa13.23□□□□□ -0.29
RFC1-217ENST00000639695 GGCXP38435 758 aa13.23□□□□□ -0.29
RFC1-217ENST00000639695 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
RFC1-217ENST00000639695 PRR14Q9BWN1 585 aa13.22□□□□□ -0.29
RFC1-217ENST00000639695 CFHP08603 1231 aa13.21□□□□□ -0.29
RFC1-217ENST00000639695 TRIM67Q6ZTA4 783 aa13.21□□□□□ -0.29
RFC1-217ENST00000639695 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
RFC1-217ENST00000639695 ACTN4O43707 911 aaKnown RBP13.19□□□□□ -0.3
RFC1-217ENST00000639695 FCHSD2O94868 740 aa13.18□□□□□ -0.3
RFC1-217ENST00000639695 S1PR4O95977 384 aa13.17□□□□□ -0.3
RFC1-217ENST00000639695 SLC19A1P41440 591 aa13.16□□□□□ -0.3
RFC1-217ENST00000639695 PXYLP1Q8TE99 480 aa13.16□□□□□ -0.3
RFC1-217ENST00000639695 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
RFC1-217ENST00000639695 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
RFC1-217ENST00000639695 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
RFC1-217ENST00000639695 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
RFC1-217ENST00000639695 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
RFC1-217ENST00000639695 FECHP22830 423 aa13.12□□□□□ -0.31
RFC1-217ENST00000639695 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
RFC1-217ENST00000639695 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
RFC1-217ENST00000639695 SPRYD7Q5W111 196 aa13.1□□□□□ -0.31
RFC1-217ENST00000639695 ADH1BP00325 375 aa13.09□□□□□ -0.31
RFC1-217ENST00000639695 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
RFC1-217ENST00000639695 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
RFC1-217ENST00000639695 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
RFC1-217ENST00000639695 GPR37O15354 613 aa13.07□□□□□ -0.32
RFC1-217ENST00000639695 OATP04181 439 aa13.06□□□□□ -0.32
RFC1-217ENST00000639695 HIC1Q14526 733 aa13.06□□□□□ -0.32
RFC1-217ENST00000639695 ZNF787Q6DD87 383 aa13.06□□□□□ -0.32
RFC1-217ENST00000639695 ZNF598Q86UK7 904 aaKnown RBP13.06□□□□□ -0.32
RFC1-217ENST00000639695 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
RFC1-217ENST00000639695 NR1I2O75469 434 aa13.05□□□□□ -0.32
RFC1-217ENST00000639695 SCUBE3Q8IX30 993 aa13.05□□□□□ -0.32
RFC1-217ENST00000639695 ZNF697Q5TEC3 545 aa13.03□□□□□ -0.32
RFC1-217ENST00000639695 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
RFC1-217ENST00000639695 TNFRSF10AO00220 468 aa13.01□□□□□ -0.33
RFC1-217ENST00000639695 MYT1Q01538 1121 aa13.01□□□□□ -0.33
RFC1-217ENST00000639695 GDF9O60383 454 aa13□□□□□ -0.33
RFC1-217ENST00000639695 PRR20EP86478 221 aa13□□□□□ -0.33
RFC1-217ENST00000639695 PRR20CP86479 221 aa13□□□□□ -0.33
RFC1-217ENST00000639695 PRR20DP86480 221 aa13□□□□□ -0.33
RFC1-217ENST00000639695 PRR20BP86481 221 aa13□□□□□ -0.33
RFC1-217ENST00000639695 PRR20AP86496 221 aa13□□□□□ -0.33
RFC1-217ENST00000639695 GNPATO15228 680 aa12.99□□□□□ -0.33
RFC1-217ENST00000639695 PHOX2BQ99453 314 aa12.99□□□□□ -0.33
RFC1-217ENST00000639695 SPSB2Q99619 263 aa12.98□□□□□ -0.33
RFC1-217ENST00000639695 POTECB2RU33 542 aa12.97□□□□□ -0.33
RFC1-217ENST00000639695 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
RFC1-217ENST00000639695 ZNF775Q96BV0 537 aaPredicted RBP12.96□□□□□ -0.33
RFC1-217ENST00000639695 DGAT1O75907 488 aa12.95□□□□□ -0.34
RFC1-217ENST00000639695 FUT2Q10981 343 aa12.95□□□□□ -0.34
RFC1-217ENST00000639695 MORN1Q5T089 497 aa12.95□□□□□ -0.34
RFC1-217ENST00000639695 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
RFC1-217ENST00000639695 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
RFC1-217ENST00000639695 FAM187AA6NFU0 413 aa12.94□□□□□ -0.34
RFC1-217ENST00000639695 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
RFC1-217ENST00000639695 THAP11Q96EK4 314 aa12.94□□□□□ -0.34
RFC1-217ENST00000639695 PKD2L1Q9P0L9 805 aa12.93□□□□□ -0.34
RFC1-217ENST00000639695 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
RFC1-217ENST00000639695 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
RFC1-217ENST00000639695 PRDM9Q9NQV7 894 aa12.9□□□□□ -0.34
RFC1-217ENST00000639695 SLC27A5Q9Y2P5 690 aa12.9□□□□□ -0.34
RFC1-217ENST00000639695 ST8SIA5O15466 376 aa12.89□□□□□ -0.35
RFC1-217ENST00000639695 FOXC1Q12948 553 aa12.89□□□□□ -0.35
RFC1-217ENST00000639695 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
RFC1-217ENST00000639695 GCGRP47871 477 aa12.88□□□□□ -0.35
RFC1-217ENST00000639695 FCF1Q9Y324 198 aaKnown RBP12.88□□□□□ -0.35
RFC1-217ENST00000639695 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
RFC1-217ENST00000639695 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
RFC1-217ENST00000639695 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
RFC1-217ENST00000639695 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
RFC1-217ENST00000639695 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
RFC1-217ENST00000639695 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
RFC1-217ENST00000639695 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
RFC1-217ENST00000639695 RPIAP49247 311 aa12.82□□□□□ -0.36
RFC1-217ENST00000639695 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
RFC1-217ENST00000639695 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
RFC1-217ENST00000639695 TULP1O00294 542 aaPredicted RBP12.79□□□□□ -0.36
RFC1-217ENST00000639695 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
RFC1-217ENST00000639695 TOR4AQ9NXH8 423 aa12.79□□□□□ -0.36
RFC1-217ENST00000639695 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
RFC1-217ENST00000639695 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
RFC1-217ENST00000639695 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms