RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 ZPR1O75312 459 aa12.5□□□□□ -0.41
SCARB2-217ENST00000639324 PRKD2Q9BZL6 878 aa12.5□□□□□ -0.41
SCARB2-217ENST00000639324 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
SCARB2-217ENST00000639324 FECHP22830 423 aa12.49□□□□□ -0.41
SCARB2-217ENST00000639324 BLOC1S3Q6QNY0 202 aa12.49□□□□□ -0.41
SCARB2-217ENST00000639324 PXYLP1Q8TE99 480 aa12.49□□□□□ -0.41
SCARB2-217ENST00000639324 SLC10A3P09131 477 aa12.48□□□□□ -0.41
SCARB2-217ENST00000639324 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
SCARB2-217ENST00000639324 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
SCARB2-217ENST00000639324 PCDHB3Q9Y5E6 796 aa12.48□□□□□ -0.41
SCARB2-217ENST00000639324 HIC1Q14526 733 aa12.47□□□□□ -0.41
SCARB2-217ENST00000639324 LCE2BO14633 110 aa12.46□□□□□ -0.41
SCARB2-217ENST00000639324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
SCARB2-217ENST00000639324 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
SCARB2-217ENST00000639324 PRR14Q9BWN1 585 aa12.45□□□□□ -0.42
SCARB2-217ENST00000639324 ACTN4O43707 911 aaKnown RBP12.44□□□□□ -0.42
SCARB2-217ENST00000639324 TLL1O43897 1013 aa12.44□□□□□ -0.42
SCARB2-217ENST00000639324 CFHP08603 1231 aa12.44□□□□□ -0.42
SCARB2-217ENST00000639324 HAP1P54257 671 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-217ENST00000639324 Q6ZNB5 142 aa12.43□□□□□ -0.42
SCARB2-217ENST00000639324 V9GY48 417 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-217ENST00000639324 GNPATO15228 680 aa12.41□□□□□ -0.42
SCARB2-217ENST00000639324 OATP04181 439 aa12.41□□□□□ -0.42
SCARB2-217ENST00000639324 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-217ENST00000639324 GFRA3O60609 400 aa12.4□□□□□ -0.42
SCARB2-217ENST00000639324 RNF223E7ERA6 249 aa12.38□□□□□ -0.43
SCARB2-217ENST00000639324 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
SCARB2-217ENST00000639324 SMYD5Q6GMV2 418 aa12.38□□□□□ -0.43
SCARB2-217ENST00000639324 TMUB1Q9BVT8 246 aa12.38□□□□□ -0.43
SCARB2-217ENST00000639324 LAPTM4AQ15012 233 aa12.37□□□□□ -0.43
SCARB2-217ENST00000639324 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
SCARB2-217ENST00000639324 GGCXP38435 758 aa12.36□□□□□ -0.43
SCARB2-217ENST00000639324 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
SCARB2-217ENST00000639324 NRG2O14511 850 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-217ENST00000639324 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-217ENST00000639324 S1PR4O95977 384 aa12.32□□□□□ -0.44
SCARB2-217ENST00000639324 PUS10Q3MIT2 529 aaKnown RBP12.31□□□□□ -0.44
SCARB2-217ENST00000639324 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-217ENST00000639324 ADH1BP00325 375 aa12.29□□□□□ -0.44
SCARB2-217ENST00000639324 TRIM67Q6ZTA4 783 aa12.29□□□□□ -0.44
SCARB2-217ENST00000639324 GPIHBP1Q8IV16 184 aa12.29□□□□□ -0.44
SCARB2-217ENST00000639324 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
SCARB2-217ENST00000639324 NR1I2O75469 434 aa12.28□□□□□ -0.44
SCARB2-217ENST00000639324 TRAF7Q6Q0C0 670 aa12.27□□□□□ -0.45
SCARB2-217ENST00000639324 ANKLE1Q8NAG6 615 aa12.27□□□□□ -0.45
SCARB2-217ENST00000639324 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
SCARB2-217ENST00000639324 SLC19A1P41440 591 aa12.26□□□□□ -0.45
SCARB2-217ENST00000639324 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
SCARB2-217ENST00000639324 PLA2G2CQ5R387 149 aa12.25□□□□□ -0.45
SCARB2-217ENST00000639324 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
SCARB2-217ENST00000639324 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
SCARB2-217ENST00000639324 FUT2Q10981 343 aa12.23□□□□□ -0.45
SCARB2-217ENST00000639324 MORN1Q5T089 497 aa12.23□□□□□ -0.45
SCARB2-217ENST00000639324 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
SCARB2-217ENST00000639324 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
SCARB2-217ENST00000639324 SLC6A16Q9GZN6 736 aa12.22□□□□□ -0.45
SCARB2-217ENST00000639324 GCGRP47871 477 aa12.21□□□□□ -0.45
SCARB2-217ENST00000639324 THAP11Q96EK4 314 aa12.21□□□□□ -0.45
SCARB2-217ENST00000639324 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
SCARB2-217ENST00000639324 SPSB2Q99619 263 aa12.2□□□□□ -0.46
SCARB2-217ENST00000639324 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
SCARB2-217ENST00000639324 SLC27A5Q9Y2P5 690 aa12.18□□□□□ -0.46
SCARB2-217ENST00000639324 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
SCARB2-217ENST00000639324 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
SCARB2-217ENST00000639324 SULF1Q8IWU6 871 aa12.15□□□□□ -0.46
SCARB2-217ENST00000639324 FAM160A2Q8N612 972 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-217ENST00000639324 PRR20EP86478 221 aa12.14□□□□□ -0.47
SCARB2-217ENST00000639324 PRR20CP86479 221 aa12.14□□□□□ -0.47
SCARB2-217ENST00000639324 PRR20DP86480 221 aa12.14□□□□□ -0.47
SCARB2-217ENST00000639324 PRR20BP86481 221 aa12.14□□□□□ -0.47
SCARB2-217ENST00000639324 PRR20AP86496 221 aa12.14□□□□□ -0.47
SCARB2-217ENST00000639324 ZNF697Q5TEC3 545 aa12.14□□□□□ -0.47
SCARB2-217ENST00000639324 GDF9O60383 454 aa12.13□□□□□ -0.47
SCARB2-217ENST00000639324 IRF6O14896 467 aa12.12□□□□□ -0.47
SCARB2-217ENST00000639324 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
SCARB2-217ENST00000639324 CD46P15529 392 aa12.11□□□□□ -0.47
SCARB2-217ENST00000639324 BRICD5Q6PL45 260 aa12.11□□□□□ -0.47
SCARB2-217ENST00000639324 TNFRSF10AO00220 468 aa12.1□□□□□ -0.47
SCARB2-217ENST00000639324 RNF19BQ6ZMZ0 732 aa12.1□□□□□ -0.47
SCARB2-217ENST00000639324 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-217ENST00000639324 FCF1Q9Y324 198 aaKnown RBP12.09□□□□□ -0.47
SCARB2-217ENST00000639324 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-217ENST00000639324 PKD2L1Q9P0L9 805 aa12.07□□□□□ -0.48
SCARB2-217ENST00000639324 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-217ENST00000639324 MYT1Q01538 1121 aa12.06□□□□□ -0.48
SCARB2-217ENST00000639324 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
SCARB2-217ENST00000639324 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-217ENST00000639324 MSS51Q4VC12 460 aa12.04□□□□□ -0.48
SCARB2-217ENST00000639324 HLA-CQ95604 372 aa12.04□□□□□ -0.48
SCARB2-217ENST00000639324 DGAT1O75907 488 aa12.03□□□□□ -0.48
SCARB2-217ENST00000639324 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
SCARB2-217ENST00000639324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCARB2-217ENST00000639324 TULP1O00294 542 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-217ENST00000639324 RPIAP49247 311 aa12.02□□□□□ -0.49
SCARB2-217ENST00000639324 KDM4AO75164 1064 aa12.01□□□□□ -0.49
SCARB2-217ENST00000639324 ZNF787Q6DD87 383 aa12.01□□□□□ -0.49
SCARB2-217ENST00000639324 FAM187AA6NFU0 413 aa12□□□□□ -0.49
SCARB2-217ENST00000639324 FOXC1Q12948 553 aa11.99□□□□□ -0.49
SCARB2-217ENST00000639324 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
SCARB2-217ENST00000639324 POTECB2RU33 542 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms