RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
SCARB2-216ENST00000639300 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
SCARB2-216ENST00000639300 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
SCARB2-216ENST00000639300 HMOX1P09601 288 aa18.03■□□□□ 0.48
SCARB2-216ENST00000639300 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
SCARB2-216ENST00000639300 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
SCARB2-216ENST00000639300 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.47
SCARB2-216ENST00000639300 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
SCARB2-216ENST00000639300 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
SCARB2-216ENST00000639300 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
SCARB2-216ENST00000639300 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
SCARB2-216ENST00000639300 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
SCARB2-216ENST00000639300 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
SCARB2-216ENST00000639300 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
SCARB2-216ENST00000639300 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
SCARB2-216ENST00000639300 FOXD4L5Q5VV16 416 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-216ENST00000639300 FOXD4L4Q8WXT5 416 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-216ENST00000639300 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
SCARB2-216ENST00000639300 NECTIN2Q92692 538 aa17.97■□□□□ 0.47
SCARB2-216ENST00000639300 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
SCARB2-216ENST00000639300 GOLGA6L3A6NEY3 463 aa17.97■□□□□ 0.47
SCARB2-216ENST00000639300 BCAR3O75815 825 aa17.96■□□□□ 0.47
SCARB2-216ENST00000639300 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
SCARB2-216ENST00000639300 MSNP26038 577 aaKnown RBP17.95■□□□□ 0.46
SCARB2-216ENST00000639300 NPHP1O15259 732 aa17.95■□□□□ 0.46
SCARB2-216ENST00000639300 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
SCARB2-216ENST00000639300 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
SCARB2-216ENST00000639300 RILPL2Q969X0 211 aa17.93■□□□□ 0.46
SCARB2-216ENST00000639300 GSE1Q14687 1217 aa17.93■□□□□ 0.46
SCARB2-216ENST00000639300 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
SCARB2-216ENST00000639300 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
SCARB2-216ENST00000639300 ABCC5O15440 1437 aa17.92■□□□□ 0.46
SCARB2-216ENST00000639300 PLB1Q6P1J6 1458 aa17.92■□□□□ 0.46
SCARB2-216ENST00000639300 HECW1Q76N89 1606 aa17.92■□□□□ 0.46
SCARB2-216ENST00000639300 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
SCARB2-216ENST00000639300 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
SCARB2-216ENST00000639300 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
SCARB2-216ENST00000639300 FOXD4L6Q3SYB3 417 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-216ENST00000639300 FOXD4L3Q6VB84 417 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-216ENST00000639300 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.46
SCARB2-216ENST00000639300 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
SCARB2-216ENST00000639300 EXOSC9Q06265 439 aaKnown RBP17.89■□□□□ 0.45
SCARB2-216ENST00000639300 ST18O60284 1047 aa17.89■□□□□ 0.45
SCARB2-216ENST00000639300 PRAM1Q96QH2 718 aa17.89■□□□□ 0.45
SCARB2-216ENST00000639300 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
SCARB2-216ENST00000639300 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
SCARB2-216ENST00000639300 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
SCARB2-216ENST00000639300 TEFQ10587 303 aa17.88■□□□□ 0.45
SCARB2-216ENST00000639300 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
SCARB2-216ENST00000639300 GNAI1P63096 354 aa17.86■□□□□ 0.45
SCARB2-216ENST00000639300 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
SCARB2-216ENST00000639300 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
SCARB2-216ENST00000639300 NUTM2GQ5VZR2 741 aa17.86■□□□□ 0.45
SCARB2-216ENST00000639300 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
SCARB2-216ENST00000639300 SMG6Q86US8 1419 aaKnown RBP17.85■□□□□ 0.45
SCARB2-216ENST00000639300 DRC7Q8IY82 874 aa17.85■□□□□ 0.45
SCARB2-216ENST00000639300 FKBP5Q13451 457 aaPredicted RBP17.85■□□□□ 0.45
SCARB2-216ENST00000639300 GORABQ5T7V8 394 aa17.85■□□□□ 0.45
SCARB2-216ENST00000639300 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
SCARB2-216ENST00000639300 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
SCARB2-216ENST00000639300 NFKBIBQ15653 356 aa17.85■□□□□ 0.45
SCARB2-216ENST00000639300 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
SCARB2-216ENST00000639300 DDX49Q9Y6V7 483 aaKnown RBP17.85■□□□□ 0.45
SCARB2-216ENST00000639300 PTPRKQ15262 1439 aa17.85■□□□□ 0.45
SCARB2-216ENST00000639300 NCOA1Q15788 1441 aa17.84■□□□□ 0.45
SCARB2-216ENST00000639300 PTMSP20962 102 aa17.84■□□□□ 0.45
SCARB2-216ENST00000639300 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
SCARB2-216ENST00000639300 GPATCH3Q96I76 525 aa17.83■□□□□ 0.45
SCARB2-216ENST00000639300 BACH2Q9BYV9 841 aa17.83■□□□□ 0.44
SCARB2-216ENST00000639300 C22orf23Q9BZE7 217 aa17.83■□□□□ 0.44
SCARB2-216ENST00000639300 CABP1Q9NZU7 370 aa17.83■□□□□ 0.44
SCARB2-216ENST00000639300 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.44
SCARB2-216ENST00000639300 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
SCARB2-216ENST00000639300 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
SCARB2-216ENST00000639300 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
SCARB2-216ENST00000639300 TXNDC2Q86VQ3 553 aa17.81■□□□□ 0.44
SCARB2-216ENST00000639300 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
SCARB2-216ENST00000639300 DDX11L8A8MPP1 907 aa17.8■□□□□ 0.44
SCARB2-216ENST00000639300 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 TULP1O00294 542 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-216ENST00000639300 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCARB2-216ENST00000639300 SYAP1Q96A49 352 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-216ENST00000639300 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 MAGI1Q96QZ7 1491 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-216ENST00000639300 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 C20orf194Q5TEA3 1177 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 CHMP5Q9NZZ3 219 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 NLRP6P59044 892 aa17.79■□□□□ 0.44
SCARB2-216ENST00000639300 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
SCARB2-216ENST00000639300 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
SCARB2-216ENST00000639300 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-216ENST00000639300 CDK11BP21127 795 aaKnown RBP17.77■□□□□ 0.44
SCARB2-216ENST00000639300 PSME1Q06323 249 aa17.77■□□□□ 0.44
SCARB2-216ENST00000639300 HSP90B1P14625 803 aaKnown RBP17.77■□□□□ 0.44
SCARB2-216ENST00000639300 ARID3AQ99856 593 aa17.77■□□□□ 0.44
SCARB2-216ENST00000639300 CDK19Q9BWU1 502 aa17.77■□□□□ 0.44
SCARB2-216ENST00000639300 ANO2Q9NQ90 1003 aa17.77■□□□□ 0.44
SCARB2-216ENST00000639300 PLEKHH2Q8IVE3 1493 aa17.77■□□□□ 0.44
SCARB2-216ENST00000639300 NRDCO43847 1150 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms