RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 DNAJB2P25686 324 aa8.12□□□□□ -1.11
ATM-228ENST00000639240 COPS2P61201 443 aa8.12□□□□□ -1.11
ATM-228ENST00000639240 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
ATM-228ENST00000639240 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
ATM-228ENST00000639240 PXYLP1Q8TE99 480 aa8.11□□□□□ -1.11
ATM-228ENST00000639240 HIC1Q14526 733 aa8.09□□□□□ -1.11
ATM-228ENST00000639240 BLOC1S3Q6QNY0 202 aa8.08□□□□□ -1.12
ATM-228ENST00000639240 ZPR1O75312 459 aa8.07□□□□□ -1.12
ATM-228ENST00000639240 METTL3Q86U44 580 aaKnown RBP8.07□□□□□ -1.12
ATM-228ENST00000639240 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
ATM-228ENST00000639240 PHOX2BQ99453 314 aa8.07□□□□□ -1.12
ATM-228ENST00000639240 GNPATO15228 680 aa8.06□□□□□ -1.12
ATM-228ENST00000639240 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.06□□□□□ -1.12
ATM-228ENST00000639240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
ATM-228ENST00000639240 LCE2BO14633 110 aa8.05□□□□□ -1.12
ATM-228ENST00000639240 PCDHB3Q9Y5E6 796 aa8.05□□□□□ -1.12
ATM-228ENST00000639240 ACTN4O43707 911 aaKnown RBP8.04□□□□□ -1.12
ATM-228ENST00000639240 TLL1O43897 1013 aa8.04□□□□□ -1.12
ATM-228ENST00000639240 EMID1Q96A84 441 aaPredicted RBP8.04□□□□□ -1.12
ATM-228ENST00000639240 PRKD2Q9BZL6 878 aa8.04□□□□□ -1.12
ATM-228ENST00000639240 OATP04181 439 aa8.03□□□□□ -1.12
ATM-228ENST00000639240 CFHP08603 1231 aa8.03□□□□□ -1.12
ATM-228ENST00000639240 SMYD5Q6GMV2 418 aa8.03□□□□□ -1.12
ATM-228ENST00000639240 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
ATM-228ENST00000639240 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
ATM-228ENST00000639240 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
ATM-228ENST00000639240 SLC4A3P48751 1232 aa7.99□□□□□ -1.13
ATM-228ENST00000639240 PUS10Q3MIT2 529 aaKnown RBP7.99□□□□□ -1.13
ATM-228ENST00000639240 PRR14Q9BWN1 585 aa7.99□□□□□ -1.13
ATM-228ENST00000639240 KMT5BQ4FZB7 885 aa7.98□□□□□ -1.13
ATM-228ENST00000639240 GPIHBP1Q8IV16 184 aa7.98□□□□□ -1.13
ATM-228ENST00000639240 DAXXQ9UER7 740 aaPredicted RBP7.98□□□□□ -1.13
ATM-228ENST00000639240 V9GY48 417 aaPredicted RBP7.98□□□□□ -1.13
ATM-228ENST00000639240 GFRA3O60609 400 aa7.96□□□□□ -1.14
ATM-228ENST00000639240 S1PR4O95977 384 aa7.96□□□□□ -1.14
ATM-228ENST00000639240 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.14
ATM-228ENST00000639240 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
ATM-228ENST00000639240 LOC100996750A0A140TA64 210 aa7.95□□□□□ -1.14
ATM-228ENST00000639240 TRIM67Q6ZTA4 783 aa7.95□□□□□ -1.14
ATM-228ENST00000639240 KRTAP4-6Q9BYQ5 205 aa7.95□□□□□ -1.14
ATM-228ENST00000639240 PLA2G2CQ5R387 149 aa7.94□□□□□ -1.14
ATM-228ENST00000639240 DDX11L8A8MPP1 907 aa7.93□□□□□ -1.14
ATM-228ENST00000639240 FUT2Q10981 343 aa7.93□□□□□ -1.14
ATM-228ENST00000639240 TRAF7Q6Q0C0 670 aa7.93□□□□□ -1.14
ATM-228ENST00000639240 LIAT1Q6ZQX7 453 aa7.93□□□□□ -1.14
ATM-228ENST00000639240 ADH1BP00325 375 aa7.92□□□□□ -1.14
ATM-228ENST00000639240 GGCXP38435 758 aa7.92□□□□□ -1.14
ATM-228ENST00000639240 GCGRP47871 477 aa7.92□□□□□ -1.14
ATM-228ENST00000639240 MORN1Q5T089 497 aa7.92□□□□□ -1.14
ATM-228ENST00000639240 RDH13Q8NBN7 331 aa7.92□□□□□ -1.14
ATM-228ENST00000639240 THAP11Q96EK4 314 aa7.92□□□□□ -1.14
ATM-228ENST00000639240 NR1I2O75469 434 aa7.91□□□□□ -1.14
ATM-228ENST00000639240 IRF6O14896 467 aa7.9□□□□□ -1.14
ATM-228ENST00000639240 SLC19A1P41440 591 aa7.9□□□□□ -1.14
ATM-228ENST00000639240 MAP2K5Q13163 448 aa7.9□□□□□ -1.14
ATM-228ENST00000639240 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
ATM-228ENST00000639240 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
ATM-228ENST00000639240 NRG2O14511 850 aaPredicted RBP7.89□□□□□ -1.15
ATM-228ENST00000639240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATM-228ENST00000639240 FAM160A2Q8N612 972 aaPredicted RBP7.89□□□□□ -1.15
ATM-228ENST00000639240 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
ATM-228ENST00000639240 SPRYD7Q5W111 196 aa7.88□□□□□ -1.15
ATM-228ENST00000639240 SPSB2Q99619 263 aa7.88□□□□□ -1.15
ATM-228ENST00000639240 SLC6A16Q9GZN6 736 aa7.88□□□□□ -1.15
ATM-228ENST00000639240 PDZRN3Q9UPQ7 1066 aa7.88□□□□□ -1.15
ATM-228ENST00000639240 CD46P15529 392 aa7.87□□□□□ -1.15
ATM-228ENST00000639240 ATP6V1AP38606 617 aa7.87□□□□□ -1.15
ATM-228ENST00000639240 RSPH4AQ5TD94 716 aa7.86□□□□□ -1.15
ATM-228ENST00000639240 MDM2Q00987 491 aaPredicted RBP7.85□□□□□ -1.15
ATM-228ENST00000639240 BRICD5Q6PL45 260 aa7.85□□□□□ -1.15
ATM-228ENST00000639240 RNF19BQ6ZMZ0 732 aa7.85□□□□□ -1.15
ATM-228ENST00000639240 ZNF598Q86UK7 904 aaKnown RBP7.85□□□□□ -1.15
ATM-228ENST00000639240 SULF1Q8IWU6 871 aa7.85□□□□□ -1.15
ATM-228ENST00000639240 HLA-CQ95604 372 aa7.85□□□□□ -1.15
ATM-228ENST00000639240 CCDC102AQ96A19 550 aa7.85□□□□□ -1.15
ATM-228ENST00000639240 ZNF775Q96BV0 537 aaPredicted RBP7.85□□□□□ -1.15
ATM-228ENST00000639240 PRDM9Q9NQV7 894 aa7.85□□□□□ -1.15
ATM-228ENST00000639240 MINK1Q8N4C8 1332 aaPredicted RBP7.84□□□□□ -1.15
ATM-228ENST00000639240 REPIN1Q9BWE0 567 aaKnown RBP7.84□□□□□ -1.15
ATM-228ENST00000639240 GDF9O60383 454 aa7.83□□□□□ -1.16
ATM-228ENST00000639240 ZNF697Q5TEC3 545 aa7.82□□□□□ -1.16
ATM-228ENST00000639240 SALL2Q9Y467 1007 aaPredicted RBP7.81□□□□□ -1.16
ATM-228ENST00000639240 TNFRSF10AO00220 468 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 FMNL1O95466 1100 aaPredicted RBP7.8□□□□□ -1.16
ATM-228ENST00000639240 PRR20EP86478 221 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 PRR20CP86479 221 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 PRR20DP86480 221 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 PRR20BP86481 221 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 PRR20AP86496 221 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
ATM-228ENST00000639240 FCF1Q9Y324 198 aaKnown RBP7.8□□□□□ -1.16
ATM-228ENST00000639240 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
ATM-228ENST00000639240 KDM4AO75164 1064 aa7.78□□□□□ -1.16
ATM-228ENST00000639240 GUCA2AQ02747 115 aa7.78□□□□□ -1.16
ATM-228ENST00000639240 BCANQ96GW7 911 aa7.78□□□□□ -1.16
ATM-228ENST00000639240 FAM217BQ9NTX9 383 aaPredicted RBP7.78□□□□□ -1.16
ATM-228ENST00000639240 ZMYND10O75800 440 aa7.77□□□□□ -1.17
ATM-228ENST00000639240 MSS51Q4VC12 460 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms