RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 COPS2P61201 443 aa10.07□□□□□ -0.8
CCDC7-211ENST00000638889 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
CCDC7-211ENST00000638889 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
CCDC7-211ENST00000638889 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
CCDC7-211ENST00000638889 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
CCDC7-211ENST00000638889 ZPR1O75312 459 aa10.05□□□□□ -0.8
CCDC7-211ENST00000638889 GGCXP38435 758 aa10.05□□□□□ -0.8
CCDC7-211ENST00000638889 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
CCDC7-211ENST00000638889 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
CCDC7-211ENST00000638889 TMUB1Q9BVT8 246 aa10.05□□□□□ -0.8
CCDC7-211ENST00000638889 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
CCDC7-211ENST00000638889 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
CCDC7-211ENST00000638889 NKX2-3Q8TAU0 364 aa10.04□□□□□ -0.8
CCDC7-211ENST00000638889 GNPATO15228 680 aa10.03□□□□□ -0.8
CCDC7-211ENST00000638889 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
CCDC7-211ENST00000638889 PRKD2Q9BZL6 878 aa10.03□□□□□ -0.8
CCDC7-211ENST00000638889 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
CCDC7-211ENST00000638889 METTL3Q86U44 580 aaKnown RBP10.01□□□□□ -0.81
CCDC7-211ENST00000638889 CFHP08603 1231 aa10□□□□□ -0.81
CCDC7-211ENST00000638889 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
CCDC7-211ENST00000638889 GPR37O15354 613 aa9.99□□□□□ -0.81
CCDC7-211ENST00000638889 SLC10A3P09131 477 aa9.99□□□□□ -0.81
CCDC7-211ENST00000638889 Q6ZNB5 142 aa9.98□□□□□ -0.81
CCDC7-211ENST00000638889 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
CCDC7-211ENST00000638889 GFRA3O60609 400 aa9.96□□□□□ -0.82
CCDC7-211ENST00000638889 FECHP22830 423 aa9.96□□□□□ -0.82
CCDC7-211ENST00000638889 NR1I2O75469 434 aa9.95□□□□□ -0.82
CCDC7-211ENST00000638889 DAXXQ9UER7 740 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-211ENST00000638889 VSIG10Q8N0Z9 540 aa9.94□□□□□ -0.82
CCDC7-211ENST00000638889 NRG2O14511 850 aaPredicted RBP9.93□□□□□ -0.82
CCDC7-211ENST00000638889 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
CCDC7-211ENST00000638889 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
CCDC7-211ENST00000638889 TLL1O43897 1013 aa9.91□□□□□ -0.82
CCDC7-211ENST00000638889 ADH1BP00325 375 aa9.9□□□□□ -0.82
CCDC7-211ENST00000638889 ANKLE1Q8NAG6 615 aa9.9□□□□□ -0.82
CCDC7-211ENST00000638889 TULP1O00294 542 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-211ENST00000638889 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
CCDC7-211ENST00000638889 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
CCDC7-211ENST00000638889 SLC19A1P41440 591 aa9.88□□□□□ -0.83
CCDC7-211ENST00000638889 S1PR4O95977 384 aa9.87□□□□□ -0.83
CCDC7-211ENST00000638889 RDH13Q8NBN7 331 aa9.87□□□□□ -0.83
CCDC7-211ENST00000638889 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
CCDC7-211ENST00000638889 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
CCDC7-211ENST00000638889 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
CCDC7-211ENST00000638889 SLC6A16Q9GZN6 736 aa9.86□□□□□ -0.83
CCDC7-211ENST00000638889 PUS10Q3MIT2 529 aaKnown RBP9.85□□□□□ -0.83
CCDC7-211ENST00000638889 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
CCDC7-211ENST00000638889 ATP6V1AP38606 617 aa9.84□□□□□ -0.83
CCDC7-211ENST00000638889 GCGRP47871 477 aa9.84□□□□□ -0.83
CCDC7-211ENST00000638889 MAP2K5Q13163 448 aa9.83□□□□□ -0.84
CCDC7-211ENST00000638889 MORN1Q5T089 497 aa9.83□□□□□ -0.84
CCDC7-211ENST00000638889 SPRYD7Q5W111 196 aa9.83□□□□□ -0.84
CCDC7-211ENST00000638889 EMID1Q96A84 441 aaPredicted RBP9.83□□□□□ -0.84
CCDC7-211ENST00000638889 SPSB2Q99619 263 aa9.83□□□□□ -0.84
CCDC7-211ENST00000638889 PPEF1O14829 653 aaPredicted RBP9.82□□□□□ -0.84
CCDC7-211ENST00000638889 FUT2Q10981 343 aa9.82□□□□□ -0.84
CCDC7-211ENST00000638889 ZNF598Q86UK7 904 aaKnown RBP9.82□□□□□ -0.84
CCDC7-211ENST00000638889 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
CCDC7-211ENST00000638889 LCE2BO14633 110 aa9.81□□□□□ -0.84
CCDC7-211ENST00000638889 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
CCDC7-211ENST00000638889 LIAT1Q6ZQX7 453 aa9.8□□□□□ -0.84
CCDC7-211ENST00000638889 GRIPAP1Q4V328 841 aa9.79□□□□□ -0.84
CCDC7-211ENST00000638889 TRIM67Q6ZTA4 783 aa9.79□□□□□ -0.84
CCDC7-211ENST00000638889 THAP11Q96EK4 314 aa9.79□□□□□ -0.84
CCDC7-211ENST00000638889 MINK1Q8N4C8 1332 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-211ENST00000638889 IRF6O14896 467 aa9.78□□□□□ -0.84
CCDC7-211ENST00000638889 FMNL1O95466 1100 aaPredicted RBP9.78□□□□□ -0.84
CCDC7-211ENST00000638889 PRR20EP86478 221 aa9.78□□□□□ -0.84
CCDC7-211ENST00000638889 PRR20CP86479 221 aa9.78□□□□□ -0.84
CCDC7-211ENST00000638889 PRR20DP86480 221 aa9.78□□□□□ -0.84
CCDC7-211ENST00000638889 PRR20BP86481 221 aa9.78□□□□□ -0.84
CCDC7-211ENST00000638889 PRR20AP86496 221 aa9.78□□□□□ -0.84
CCDC7-211ENST00000638889 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
CCDC7-211ENST00000638889 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
CCDC7-211ENST00000638889 CD46P15529 392 aa9.75□□□□□ -0.85
CCDC7-211ENST00000638889 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
CCDC7-211ENST00000638889 BRICD5Q6PL45 260 aa9.74□□□□□ -0.85
CCDC7-211ENST00000638889 RPIAP49247 311 aa9.73□□□□□ -0.85
CCDC7-211ENST00000638889 GDF9O60383 454 aa9.72□□□□□ -0.85
CCDC7-211ENST00000638889 DGAT1O75907 488 aa9.72□□□□□ -0.85
CCDC7-211ENST00000638889 MSS51Q4VC12 460 aa9.72□□□□□ -0.85
CCDC7-211ENST00000638889 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
CCDC7-211ENST00000638889 FAM160A2Q8N612 972 aaPredicted RBP9.72□□□□□ -0.85
CCDC7-211ENST00000638889 Q3C1V9 767 aa9.71□□□□□ -0.86
CCDC7-211ENST00000638889 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
CCDC7-211ENST00000638889 KDM4AO75164 1064 aa9.7□□□□□ -0.86
CCDC7-211ENST00000638889 USP46P62068 366 aa9.7□□□□□ -0.86
CCDC7-211ENST00000638889 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
CCDC7-211ENST00000638889 PKDCCQ504Y2 493 aa9.7□□□□□ -0.86
CCDC7-211ENST00000638889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC7-211ENST00000638889 CCDC102AQ96A19 550 aa9.7□□□□□ -0.86
CCDC7-211ENST00000638889 CD2BP2O95400 341 aaKnown RBP9.69□□□□□ -0.86
CCDC7-211ENST00000638889 CLCN1P35523 988 aa9.68□□□□□ -0.86
CCDC7-211ENST00000638889 RNF19BQ6ZMZ0 732 aa9.68□□□□□ -0.86
CCDC7-211ENST00000638889 GPCPD1Q9NPB8 672 aa9.67□□□□□ -0.86
CCDC7-211ENST00000638889 TNFRSF10AO00220 468 aa9.66□□□□□ -0.86
CCDC7-211ENST00000638889 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
CCDC7-211ENST00000638889 MMP16P51512 607 aa9.65□□□□□ -0.86
CCDC7-211ENST00000638889 MYT1Q01538 1121 aa9.65□□□□□ -0.86
CCDC7-211ENST00000638889 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms